Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01105 ATGGCTACAACCAGTAAGTTTGCAACCATGCTGCACAGAAACACCAACAAGATGGTGGTGATTCTAGTGTATGCAGTGCTTGAATGGGTCTTGATTGCACTCCTTCTTCTTAACTCTTTGTTCAGTTATCTCATCACAAAGTTTGCCAAATGGGTTGGCCTCCAACCACCGTGTGTTTGGTGTTCAAGGGTTGATCATGTGCTGCAGCAAGAAAATGGCGCGCATGTGCACAAGGATCTCGTATGTGAGGCTCATGCAGCTGAGATTTCAAAGCTGGGTTACTGCTCAAATCATCATAGACTTGCGGAAACGAACGGCATGTGTGAGGATTGTTTGTCCTCTCGGCCAAACTATCATGAAAATTCCTTTGGAATGAGGCACAGAATCGCTTTCATTTCGTGGGTGAGTAGTCACGGCAAACATGAAAGTGGAGATAGCTTGATAAGAAGGTGCTCTTGCTGCAATGAGAGTTTGAGCAGCCAGCTTTACCCTCCTTATTTGCTGTTGAAGCCTTCATGGGGCGATGAGAATTACACGAGCAAAGGGTCCCTGATTGTGGAAGAGGCCATAGATGATGAAAAAAGTGATAAAGACCTCGACTTTGAGAGAAACAACGAGGTGGGTCATGATGATGAAGGGGTGGCAGATGAGCATCAGATACTTTCTGATATTGATAGTTTTATCCTCAGAGAGGTTGCTGAGGATCGTTCAAGTTCTGTTTCAAACTTGCACTCGGATGAAAAGGATGCGGAAAAAGATGAGAAGGAAGATGATCTCACCATTACTGAGCTGGATCCAAGTGGTGATGATAATTTTGCTTGTCAATTCACTTCCACCATGCAGGGTTCAGTCTTGGAAGATAGATCACTTGAAGTCATCAATCTGCATTTTGAGAATTATATGGCTTGTGATAGCCACCGCTTGGTGCCTGTCAAGTTAATAGACTCTGTTACCTCTTTGGATTTTGAAACATGCAAACTGGATGAGGATTTGGGGGAGAGGGAACAAAAGATTCAGACTCGGACCTTTTTTGACGATTCAACAATTGAAGCACAATCAAGTATCTTAGAAAGGGAAGAATTACTCACATTGGATGAGAATGCAGAGAAAAAAAGCATGAGAGAAATTGAAAGCTCGGAAAATTCTGTAACTTGGGAATTTGAAGGGTTGAAACCGAATTCAGAGATTACCAATATGGAAGTTCAGACTTCGCTGAATGATGACAACAGTGTTGAAGCAGCTACTGAAGAACTAGATGATACACAAGTCGATCTGCCTCGATCTCAAGAACCAGTCTTCTCTAGTGATTTCACACAAGAAGATGAATCCTCATCAAGTGAAGATGATGCTGAAATTCAAAATGCCTTTGATGAATTCATTTCTCAGAATCATCTTAGTGAGACTCGAAGTTTATCTAATGATGACAACAGTGTGGAAGCAGCTATGCAAGGATCAGAAAGTCCACCAGGAGTTAAGTTGTCTCCGTCTCAAGAACCAGACTGCTCTCTTCAATGCATATCAGAAGACGAATCTTCTTCATCAAGTGATGATGATACTGAAGTTCAAAATGCCTTTGATGCATTTATTGCTCAGAATCATCTAATTCAGCCTCAAAGTTTATCCAATGATTATAAAAGCATAGAAGCAGATATGGAAGAACCAGAAAATACACGAGCTAATCATCCTCCGTCTGAAGAACCAGCTAGCTCATCTCAATGCATACCAGAAGATCAATCTACCACAAGTGAGGATAACCCTGAAGCTCCAAATGCCTTTGATGAATTCATTACCCAGAATAATCCCAGTACAGATAAAACAAGTGCAAATGATAACGAGAATGCTAAGATGAATGAGAAAACAACAGCAGTTGAGAAAAATCATGAAGAAACAAGCAATGAATCTTCCAAGTTCTCAGAGCCGTATGAAGTAGAAGAAGATAAACTTCCTGAGACTCCTAGATCTGTAGATGGCCTTCAGTACCTGCTTAAAAGAGAACCAGTACCAGATGATTTTATGGATGGTAATGTTGCAAGTGAGGTAGAATGTGGCGATCCATCATCCACAATTGATCGGCTAAAAACGGTTCTAAAAGCTGAAAGAAGGGCCCTAACAGCTGTATATCAAGAACTAGAAGAAGAGAGAAGTGCATCAGCAATAGCTGCCAACCAGACAATGGCAATGATTACAAGGCTGCAGGAAGAAAAGGCTGCAATGAAGATGGAAGCATTGCAATACCAGAGAATGATGGAAGAACAATCAGAGTATGATCAGGAAGCTTTACAGCTTTTGAATGAGTTGATGATGAAAAGGGAGAAAGAGAAGCAGGAACTCGAGAAGGAGTTGGAAGAGTACAGGCAGAAGGTAATGGAATATGAAGCAAAAGAGAAACTGATGGTGCTGAGAAGAATGAAAGATGGAAGTGTAAGAAGTAGAGACACCTCTTCTTCTTGCAGCAACATGAACTACAGTGATGATCTATCCATTGATCTTAACCGCGAGGTGCGTGACGAAGATAATGTTTTATTCAACCATGAGGAAAGCAGCCACAATAATGCATCTGAAGATACAGTTTCTAATGTGGAGGAGATGGCACTAGACTGTGTAAAGCATGTGAGTACTCTTGATGACACATTAGCAGAATTTGAGGAAGAGAGAGCTTCCATTCTAGAACAACTCAAAGCATTAGAGGAAAAAATCATTTCATTGGGAGATAACGAGGAACTCCTTGATGATATCAAACTGATTGAGCATTCATCAATGTATGGTGGTGACAGAGACTTGAATGAGAATGGATATTTTAATGGGTTTTCAGATGATAAACAATCTCCAATAGGTTCCTTGGCAAAGAAGCTACTGCCATATTTAGATGCAGCAGAAAATGAGACTGAGGAAGCTTACACACTAGAGAGACAATTGGAGTCTGAATCATCTGATTTGCAAAACTCAGTTAATGTGCTTGAAATGGATAGCATGAAGACATCCATTGAAGAGGAGGTTGATCGCGTTTATGAGAGGCTACAAGCTCTTGAAACTGATAAGGAGTTTCTGCAACACTGCATGGGTTCCATACAAAATGGTGGGGAGAAAGGAGTGGATTTGCTTCAAGAAATCTTACAGCATCTTCGTGATCTTAAGGATGTGGAACTCCGCTTGAAGACCTTGGGAAATGATCCACTATAG 3180 0.4113 MATTSKFATMLHRNTNKMVVILVYAVLEWVLIALLLLNSLFSYLITKFAKWVGLQPPCVWCSRVDHVLQQENGAHVHKDLVCEAHAAEISKLGYCSNHHRLAETNGMCEDCLSSRPNYHENSFGMRHRIAFISWVSSHGKHESGDSLIRRCSCCNESLSSQLYPPYLLLKPSWGDENYTSKGSLIVEEAIDDEKSDKDLDFERNNEVGHDDEGVADEHQILSDIDSFILREVAEDRSSSVSNLHSDEKDAEKDEKEDDLTITELDPSGDDNFACQFTSTMQGSVLEDRSLEVINLHFENYMACDSHRLVPVKLIDSVTSLDFETCKLDEDLGEREQKIQTRTFFDDSTIEAQSSILEREELLTLDENAEKKSMREIESSENSVTWEFEGLKPNSEITNMEVQTSLNDDNSVEAATEELDDTQVDLPRSQEPVFSSDFTQEDESSSSEDDAEIQNAFDEFISQNHLSETRSLSNDDNSVEAAMQGSESPPGVKLSPSQEPDCSLQCISEDESSSSSDDDTEVQNAFDAFIAQNHLIQPQSLSNDYKSIEADMEEPENTRANHPPSEEPASSSQCIPEDQSTTSEDNPEAPNAFDEFITQNNPSTDKTSANDNENAKMNEKTTAVEKNHEETSNESSKFSEPYEVEEDKLPETPRSVDGLQYLLKREPVPDDFMDGNVASEVECGDPSSTIDRLKTVLKAERRALTAVYQELEEERSASAIAANQTMAMITRLQEEKAAMKMEALQYQRMMEEQSEYDQEALQLLNELMMKREKEKQELEKELEEYRQKVMEYEAKEKLMVLRRMKDGSVRSRDTSSSCSNMNYSDDLSIDLNREVRDEDNVLFNHEESSHNNASEDTVSNVEEMALDCVKHVSTLDDTLAEFEEERASILEQLKALEEKIISLGDNEELLDDIKLIEHSSMYGGDRDLNENGYFNGFSDDKQSPIGSLAKKLLPYLDAAENETEEAYTLERQLESESSDLQNSVNVLEMDSMKTSIEEEVDRVYERLQALETDKEFLQHCMGSIQNGGEKGVDLLQEILQHLRDLKDVELRLKTLGNDPL 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01105 1059 Pfam Zein-binding 691 781 IPR007656 -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 456 510 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 415 648 - -
Vimu1g01105 1059 Coils Coil 871 905 - -
Vimu1g01105 1059 Coils Coil 693 713 - -
Vimu1g01105 1059 ProSiteProfiles GTD-binding domain profile. 687 785 IPR007656 -
Vimu1g01105 1059 Coils Coil 992 1012 - -
Vimu1g01105 1059 Coils Coil 721 794 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 196 215 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 546 560 - -
Vimu1g01105 1059 Coils Coil 955 989 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 617 648 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 562 616 - -
Vimu1g01105 1059 PANTHER MYOSIN-BINDING PROTEIN 2 501 1053 IPR039306 GO:0017022
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 240 262 - -
Vimu1g01105 1059 MobiDBLite consensus disorder prediction 238 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01105 Vimu-Chr1 8314806 8318740 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01105 1 8314806 8318740 Vimu1g01105 1 8314806 8318740 ECH