Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00251 ATGGAAGAGTGTCCCGAACAATATGGTGTCACCTTGGTCTTCCAAAACCCAAGGCATGATAAGACATCTGAGTTTATAATGAAAGAGATAAGTATAGACAAAGAGCATGTGTTGCATATTTCTGAGGTTAACGAGGAAATCAAGTTTATAACCAAAGGGGAACTTGGGACGTCAATTGTAACGTGCAGGCAGAAATTTGATGTCGACAAGCCTGAGGAATCAGTTGTGATAGAGATGAATGAGCCTATACGCGGGACATTTTCATTGAAGTTGATAAATTCTGTCACAAAAGCAGCGTGCTTATCTGATAGAGTCAGTTTCTTAAGAGAGATGCCTTCTGTGGTTGAGTACAAAATTGTCCAGACTGGTTATGCTCGCGAAGGTTCAGGGTAA 393 0.4097 MEECPEQYGVTLVFQNPRHDKTSEFIMKEISIDKEHVLHISEVNEEIKFITKGELGTSIVTCRQKFDVDKPEESVVIEMNEPIRGTFSLKLINSVTKAACLSDRVSFLREMPSVVEYKIVQTGYAREGSG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00251 130 PANTHER PROLIFERATING CELL NUCLEAR ANTIGEN 39 126 IPR000730 GO:0003677|GO:0006275|GO:0030337
Vimu1g00251 130 Gene3D DNA Polymerase III, subunit A, domain 2 21 126 - -
Vimu1g00251 130 Pfam Proliferating cell nuclear antigen, C-terminal domain 27 125 IPR022649 GO:0003677|GO:0006275
Vimu1g00251 130 SUPERFAMILY DNA clamp 36 124 IPR046938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00251 Vimu-Chr1 1452177 1453406 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00251 1 1452177 1453406 Vimu1g00251 1 1452177 1453406 ECH
Vimu2g01878 2 13621360 13627091 Vimu1g00251 1 1452177 1453406 PCT