Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04796 ATGAGAACCCAACACCTTCGCCTTCACCACCTCCTCCTCAGTCTCTTCCTCTTCGCAGCCACATTCTCTCCGGTGCCCACCGCTGCAGACGACGTTTCCGCCCCTGCGCCTGACAACGGTGACACCGAGTTCATCCGCTCCAGCTGCAACTCCACTCTATACCCTGACGTGTGCTTCACCTCCCTCTCCCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCAGCTGGCGCGCGTGGCCATCGGCGTCAGTCTCTCCAAGGCCCACCGCATCGCGTCCTACATCTCCAACCTAACGCATGAAGCCGACTATGGCACGAGTGGCACGCGCACGCTGGGCGATGCCGTGGACGAAATCCGCGGGTCTCTGAAGCAGATGCGGCAGATTGGCGCAGCCGGCGAGGGCTCCGAATCCTTCCTCTTCCAGATGAGCAACGTGCAAACGTGGATGAGCGCTGCACTCACCGACGAGGAGACCTGTACGGACGGATTCCAAGACGTACCGGAATGCCCCGTGAAAGCGGATGTATGCAATCGCGTCACCAACGTGAAGAAGTTCACCAGCAACGCTTTGGCCCTTGTCAACTCCTACGCCAGCAAGGGTTCGCCCTGA 612 0.6095 MRTQHLRLHHLLLSLFLFAATFSPVPTAADDVSAPAPDNGDTEFIRSSCNSTLYPDVCFTSLSRYANAVQQNPGQLARVAIGVSLSKAHRIASYISNLTHEADYGTSGTRTLGDAVDEIRGSLKQMRQIGAAGEGSESFLFQMSNVQTWMSAALTDEETCTDGFQDVPECPVKADVCNRVTNVKKFTSNALALVNSYASKGSP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04796 203 SMART PMEI_2 40 193 IPR006501 GO:0004857
Vimu11g04796 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 193 - -
Vimu11g04796 203 Pfam Plant invertase/pectin methylesterase inhibitor 44 193 IPR006501 GO:0004857
Vimu11g04796 203 CDD PMEI-like_3 47 199 - -
Vimu11g04796 203 NCBIfam pectinesterase inhibitor domain 11 197 IPR006501 GO:0004857
Vimu11g04796 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 197 IPR035513 -
Vimu11g04796 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 197 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04796 Vimu-Chr11 68039694 68040335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04796 27 194 Carbohydrate Esterase AT5G04960 26.901 9.39e-12 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04796 11 68039694 68040335 Vimu11g04796 11 68039694 68040335 ECH