Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02622 ATGCACCCGTACAACCGGCTACCGAGCAGCGGGCACTCGACGCCGTCGCCGCCGCCGTCGCCGCTCCGGTCGCCGAGGCTCCGCCACGGGCGGTCCAAGACCGGGCGGTTCTCTCCAAACCGGGGGGGCGGTCGGACTGCAGCGCAGCGGCTCAGCTGGATGTTTCTATCCGTCCTGCTCCGACGACAGGGTGTTTTCCTCTTCGCTCCTCTCATATACATCTCTGGCATGCTGCTTTACATGGGAACCGCTTCCTTCGACGTCGTTCCGGTCATAAAGCACCGTCCCGCGCCCGGCTCTGTTTACCGTAGCCCTCAGCTGTTCGCCAAGCTTCACCTCGAAATGGATTCTGACAATTCCTCCGTCGATGCGGTTATTCTGACGGAGTTCATTTTAGTTTGTTTTATTTCTTTGATTGGAGTCGAGTTTCGACTGGTTGTCCTTTTCAATGTAGATTGTTTGTCCGGTCTGATTCCAGAGGCTAGGATGGACACATTCAGTGACAAGCTCATAAATTTCCTTTCAGATATCAACAATATGGAAGACTCCCTACAAAGGTGTTTACTGTGTTGGGTTAACTATGAACGTACATGTCTTTTGTTGTTGATAGTCCTACCTGAATCAAATGGATACATATACGTGGAGGCTAATGGTGGCTTAAATCAGCAAAGGACATCCGTATGCAATGCTGTTGCAGTCGCTGGCTATCTCAATGCTACGCTTGTAATCCCCAACTTTCATTATCATAGCATATGGAAAGACCCTAGCAAATTCAAGGACATTTATGATGAAGAATTTTTTGTGAATACCTTGAAAAATGATGTGCGGGTGGTTGACAAGATTCCTGAATACCTAATGGAAAGATTTGGCAGCAACATGACAAACGTTCACAATTTCAGGATCAAGGCCTGGTCATCTATTCAGTATTACAGAGATGTGGTACTCCCTAAGTTACTTGAAGAGAAGGTTATAAGGATTTCACCATTTGCAAATAGATTGTCATTTGATGCTCCTCCAGTTGTCCAGCGGCTTAGATGCTTAGCAAATTATGAGGCTTTACGGTTTTCAAGTCCTATATTGTCCATAGGTGAAGCTTTGGTTGAAAGAATGAGAAAACACAGTGCCATTAATGGTGGTAAATATGTATCCGTACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGTTGTGTTTTCGACGGTGGGAAACAGGAGAGAGAAGATATGATTGCAGCTAGAGAGAGAGGTTGGAAAGGGAAATTTACAAAACCGGGACGAGTTATACGTCCAGGAGCAATCAGGATCAATGGGAAGTGTCCCCTTACCCCCTTAGAGGTTGGCCTTATGCTGAGGGGAATGGGTTTCACGAAGAACACTTCTATCTTTTTAGCATCTGGGAAAATATATAATTCGGAGAAAACTATGGCCCCGCTACGAGAAATGTTTCCTAATTTACATTCTAAGGAGACCCTGGCTTCTGAAGAGGAGCTTGCTCCCTTTAAGAGTTATTCTTCCAGGATGGCTGCTATAGATTACACTGTTTGTCTTCACAGTGAGGTGTTTGTCACAACTCAGGGGGGCAACTTCCCTCATTTTCTGCTGGGTCACAGGAGATACTTGTATGGTGGACATGCTAAGACAATTAAACCTGATAAGCGGAAGTTGGCATTACTGTTTGATAATCCCAATATAGGATGGAAAAGTCTTAAGCGACAACTGCTGAGCATGAGGTCACATAGTGATTCGAAGGGGGTTGAACTCAAAAGACCAAATGATTCTATATACAGCTTTCCGTGCCCAGATTGTATGTGCCGTGCCAATAAAACTGATGATTCAAGATCTTCATCGGCAACTTGA 1860 0.4554 MHPYNRLPSSGHSTPSPPPSPLRSPRLRHGRSKTGRFSPNRGGGRTAAQRLSWMFLSVLLRRQGVFLFAPLIYISGMLLYMGTASFDVVPVIKHRPAPGSVYRSPQLFAKLHLEMDSDNSSVDAVILTEFILVCFISLIGVEFRLVVLFNVDCLSGLIPEARMDTFSDKLINFLSDINNMEDSLQRCLLCWVNYERTCLLLLIVLPESNGYIYVEANGGLNQQRTSVCNAVAVAGYLNATLVIPNFHYHSIWKDPSKFKDIYDEEFFVNTLKNDVRVVDKIPEYLMERFGSNMTNVHNFRIKAWSSIQYYRDVVLPKLLEEKVIRISPFANRLSFDAPPVVQRLRCLANYEALRFSSPILSIGEALVERMRKHSAINGGKYVSVHLRFEEDMVAFSCCVFDGGKQEREDMIAARERGWKGKFTKPGRVIRPGAIRINGKCPLTPLEVGLMLRGMGFTKNTSIFLASGKIYNSEKTMAPLREMFPNLHSKETLASEEELAPFKSYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHAKTIKPDKRKLALLFDNPNIGWKSLKRQLLSMRSHSDSKGVELKRPNDSIYSFPCPDCMCRANKTDDSRSSSAT 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02622 619 MobiDBLite consensus disorder prediction 1 45 - -
Vimu11g02622 619 CDD O-FucT_plant 211 545 IPR024709 -
Vimu11g02622 619 PIRSF UCP009360 27 609 IPR024709 -
Vimu11g02622 619 PANTHER O-FUCOSYLTRANSFERASE FAMILY PROTEIN 54 616 IPR024709 -
Vimu11g02622 619 Pfam GDP-fucose protein O-fucosyltransferase 211 541 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02622 Vimu-Chr11 46482883 46488593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02622 207 608 Miscellaneous Gene Families AT1G22460 39.667 5.02e-94 298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02622 11 46482883 46488593 Vimu11g02622 11 46482883 46488593 ECH