Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02618 ATGGACCTTAATGAAGTGCAGCATTCTCATTGCCTAGAGATGACCATGGAAGTGCACCAAGTTCTTCCACCACCCCACAAGACCACTCTGCACAAACTCAAGACCAGGCTCAAGGAAACCTTTTTCCCTGATGACCCTCTTCGCCAATTCAAGGGCCAACCACTCAAGACAAAGCTAATTCTTGCTGCTCAATATCTCTTCCCTATTCTTCAATGGGGTCCTAAGTACACCTTCAATCTCTTCAAGTCTGACCTTGTTGCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTTGCAAATCTTCCTCCGATTGTGGGACTATATTCGAGTTTTGTCCCGCCGCTTGTTTATGCTGTTCTTGGAAGCTCGAGGGACCTAGCTGTGGGACCTGTGTCTATTGCTTCTCTTGTGCTGGGATCGATGCTGAGACAGGAAGTGTCTCCCACAGCAGACCCAGTTCTGTTTCTTCAATTGGCTTTTACTTCAACTTTTTTTGCCGGTCTCTTTCAAGCTTCGCTTGGAATCCTGAGGCTCGGTTTCATAATTGATTTTCTATCGAAGGCAATTCTGATTGGGTTCATGGCTGGAGCTGCTATTATTGTCTCCCTGCAACAACTTAAGAGTCTGCTTGGAATCTCACATTTCACTAATCAGATGGGACTGATTCCTGTGATGACTTCTGTTTTCAATAATATTCATGAGGTTGTGGTCATGGCAAACGATTCTGATGGGGATTTGCTTTCTAGTGCTACTACTATTAGCAAGACACGTTCTGGAGCTCCTCTTTTGTGTGTTATCATTTCCACACTTCTGGTTTTTGCAATTAAGGGTCAAAACCATGGCATTAGTGTGATTGGCAAATTGCAACAAGGGATAAATCCTCCTTCATGGAATATGTTACGCTTTCATGGAAGTCACTTAGGCCTAGTTATGAAAACAGGGCTTATCACTGGCATTTTGTCTCTCACTGAAGGTATTGCAGTAGGAAGAACATTTGCAGCTTTGAAAAACTACAAAGTGGATGGAAACAAGGAAATGATGGCAATTGGATTTATGAATGTGGTTGGCTCCTCCACTTCCTGTTATGTTACAACAGGTGCTTTCTCTCGGTCAGCTGTTAACAACAACGCAGGTGCAAAAACAGCTGTGTCAAATGTAGTTATGTCTGTCACAGTCATGGTCACACTCCTTTTTCTGATGCCATTGTTCCAATACACACCCAATGTTGTATTGGGTGCAATCATAGTCACTGCAGTGATTGGCCTCATTGATCTCCCTGCTGCTTATAACATTTGGAAGATCGACAAATTCGATTTCCTAGTCATGTTGACTGCTTTCATGGGTGTTCTTTTCTTCTCTGTCCAAGGAGGCCTTGCTCTTGCTGTTGGGTTATCAACTTTCAAGATACTGATGCAAATTACAAGGCCAAAAACAGTAATGTTGGGGAAGATTCCAGGAACAGACATATACAGAAATCTTCATCAGTACAAGGAAGCTGTGAGAGTACCTGAAGAAGAGGAAGACAACATAAAAGAACAATCAAGCCTTCGATTCTTGATATTGGAAATGTCTGGTAATGTCGTTATATTGATCATACCTATTTATCCCACAAGACATGCTGAACTAATCACTTTGAAATTTGCAGCTGTGAGTGCCATTGATACAAGCGGAATCTCACTTTTCAAAGAGTTGAAAGCAAACTTGGAAAAGAAGGGTCTTGTGTTGGTGAATCCCCTCGCTGAGGTCATTGAGAAGCTGAAAAAAGTTGATGAAGCTACTGATTTCATGCATGCAGATAGCCTTTTCTTGACAGTTGGAGAGGCTGTAGCTTCACTTTCATCGACAATGAAGGGTCAATCACCAACTTTTCTTGGAGGGGCACACACAGTTGTGTAA 1917 0.4283 MDLNEVQHSHCLEMTMEVHQVLPPPHKTTLHKLKTRLKETFFPDDPLRQFKGQPLKTKLILAAQYLFPILQWGPKYTFNLFKSDLVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGISHFTNQMGLIPVMTSVFNNIHEVVVMANDSDGDLLSSATTISKTRSGAPLLCVIISTLLVFAIKGQNHGISVIGKLQQGINPPSWNMLRFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAAYNIWKIDKFDFLVMLTAFMGVLFFSVQGGLALAVGLSTFKILMQITRPKTVMLGKIPGTDIYRNLHQYKEAVRVPEEEEDNIKEQSSLRFLILEMSGNVVILIIPIYPTRHAELITLKFAAVSAIDTSGISLFKELKANLEKKGLVLVNPLAEVIEKLKKVDEATDFMHADSLFLTVGEAVASLSSTMKGQSPTFLGGAHTVV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02618 638 NCBIfam sulfate permease 68 615 IPR001902 GO:0016020|GO:0055085
Vimu11g02618 638 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
Vimu11g02618 638 PANTHER SULFATE TRANSPORTER 30 620 IPR001902 GO:0016020|GO:0055085
Vimu11g02618 638 ProSiteProfiles STAS domain profile. 476 619 IPR002645 -
Vimu11g02618 638 Pfam STAS domain 496 615 IPR002645 -
Vimu11g02618 638 Pfam Sulfate permease family 81 451 IPR011547 GO:0016020
Vimu11g02618 638 Gene3D STAS domain 482 622 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02618 Vimu-Chr11 46420997 46429196 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02618 2 626 Inorganic Solute Cotransporters AT3G15990 57.658 0.0 719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02618 11 46420997 46429196 Vimu11g02618 11 46420997 46429196 ECH