Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02604 ATGACAGGGTTGGCTACTTTGTATGACTATACAAGGAAGACTCCGTACGAGGATGATCTGGTTGATCGGTTCTTGAACATTCCGGAGGTGAAGAAGGCACTGGGGGTGAAGGAATCGTTTGTGTATGAGATATGCAGTGATGTTGTTGGGAAGGCATTACATGGTGATGTGATGAAAAGTGTGAAACAGATGGTGGAATACTTGATGAGGAAGAGCAGGGTGTTGCTTTATCAAGGTGAGTATGATTTGAGGGATGGAGTGGTCCAAACAGAGGTTTGGGTTAAGACAATGAAATGGGAAGGGATAGAAGAGTTTCTTAATGCTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGCTATGTGCAGTCTTGGAAGTCTCTTACCAATGTTGTCGTTTTGGGAGCTGGCCATCTTCTTCCCACTGACCAACCTCTTCATTCTCAAGCTACGATTGAAGATTGGGTTCTTCAAAGGGCTTTGTTTGAAAATGTATCAAGTAAGTCTGTACTTGTTGAATAA 525 0.4305 MTGLATLYDYTRKTPYEDDLVDRFLNIPEVKKALGVKESFVYEICSDVVGKALHGDVMKSVKQMVEYLMRKSRVLLYQGEYDLRDGVVQTEVWVKTMKWEGIEEFLNAERKIWKVNGELAGYVQSWKSLTNVVVLGAGHLLPTDQPLHSQATIEDWVLQRALFENVSSKSVLVE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02604 174 Pfam Serine carboxypeptidase 12 157 IPR001563 GO:0004185|GO:0006508
Vimu11g02604 174 SUPERFAMILY alpha/beta-Hydrolases 9 158 IPR029058 -
Vimu11g02604 174 Gene3D alpha/beta hydrolase 4 173 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02604 Vimu-Chr11 46289606 46290130 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02604 56 162 Calmodulin-binding Proteins AT2G22960 22.222 1.01e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02604 11 46289606 46290130 Vimu11g02604 11 46289606 46290130 ECH