Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02596 ATGATAAGCTGGAACGATTTGTATACCGTCTTGACGGCGGTGATTCCGCTCTATGTCGCCATGATCTTAGCGTACGGTTCGGTACGGTGGTGGAAGATATTCTCGCCGGACCAATGCTCCGGCATAAACCGCTTCGTCGCGATCTTTGCGGTTCCCCTTCTTTCCTTCCACTTCATCTCCAGCAACAACCCTTACGCCATGAACTTCCGCTTCATCGCTGCCGACACGCTCCAGAAAATCATCATGCTCTTTGCGTTGGCAATCTGGACCAACTTCACCGCCAACGGCAGCTTGGAGTGGATGATTACCATTTTCTCCCTCTCTACATTGCCCAACACGCTCGTCATGGGTATCCCGCTCCTTATCGCCATGTACGACGAATATGCCGGCAGCCTCATGGTCCAGGTGGTGGTGCTCCAGTGCATCATCTGGTACACCCTCCTCCTCTTCCTCTTCGAGTACCGCGGCGCCAAGCTCTTGATCATGGAACAGTTCCCCGAAACCGCTGCTTCCATAGTTTCCTTCAAGGTCGACTCCGACGTCGTTTCCCTCGACGGGAGGGATTTCCTCGAAACCGATGCTGAAGTCGGCGACGATGGGAAGCTCCACGTGACCGTTAGGAAGTCCAATGCTTCTAGAAGGTCCTTCATGATGACACCTCGCCCGTCTAACCTCACCGGTGCCGAGATTTACAGCCTCAGCTCCTCCCGTAACCCCACGCCACGTGGCTCCAACTTCAACCACGCGGATTTCTACTCCATGATGGGGTACGCACCTAGGCATTCTAACTTCGGCGCTGCGGATTTGTACTCCGTGCAGTCCACGTCACGCGGAGTCACCCCGAGGCCCTCCAATTTCGAAGAGAACTCTGCACCCGCACCACAGGCTATCAGCTCCCCAAGGTTCGGCTTCTACCCCGCCGTGCAGACCGTGCCCGCCGCCTACCCTGCTCCCAACCCGGAATTCTCTTCTGGGTTAACGAAGAGTGTGAGCAAGAATTCGCAGACGCAGCCACAGCCTCAGTCTCAGCCGCAGGCTCAAGCTCAAGCTCCTCAAGTTGCTCAACCGCCCAATAGCAGTAACAAAGCCAGCCACGACGCTAAGGAGCTCCACATGTTCGTGTGGAGCTCTAGCGCCTCACCGGTTTCTGAAGCCGGTGGCCTCCATGTATTCAGTGGAGCCGATTTCGGAGCTTCCGACCAATCGGGCCGCTCCGATCAAGGTGCCAAGGAGATTAGGATGTTAGTAGCGGACGAACACCCTCAAAATGGAGAAGCTAACAAAGCTGCAGCAGAAGGAGAATTTAGGGGTGAAGATTTGAAGTTTCCAGGGAAAGAAGGTGAACAGGCGGAGGAAGAAGCAGAGAAAGCGGGCGTGGCCGGGTCCAACAAGCTGGGTTCCAGTTCAACGGCGGAGCTACACCCGAAATCGGGCGTAGCCGTGGCGGGGAAACACATGCCTCCGGCGAGTGTGATGACTCGTCTCATACTGATTATGGTGTGGCGGAAGCTTATCCGCAACCCCAACACTTACTCTAGTCTCATTGGTGTGATCTGGTCTCTGGTGGCGTTTAGGTGGCATGTGCACATGCCCAAAATAATAGAGAAATCAATCTCCATACTGTCTGATGCTGGTCTTGGAATGGCTATGTTCAGCTTGGGTGAGTGGCCGGCGGTGGTGGGGACCTGTACCATTTTTGGACCCGGATTAGGCAAAGGTCTCTTCATGGCTCTTCAACCCAATATAATTGCGTGTGGGAACTCAGTTGCAACATTTGCCATGGCTGTTCGATTCCTCACAGGTCCCGCCGTCATGGCTGCAGCTTCCATCGCTGTTGGCCTACGTGGCACTCTCTTACGTATAGCTATTGTTCAGGCTGCACTTCCGCAAGGGATTGTTCCATTTGTGTTTGCGAAGGAATACAACGTTCATCCAGCCATTCTTAGCACAGGGGTTATATTTGGGATGCTGATAGCTCTACCAATTACTCTAGTCTACTACATATTACTTGGTTTGTAA 2019 0.5384 MISWNDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFISSNNPYAMNFRFIAADTLQKIIMLFALAIWTNFTANGSLEWMITIFSLSTLPNTLVMGIPLLIAMYDEYAGSLMVQVVVLQCIIWYTLLLFLFEYRGAKLLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEVGDDGKLHVTVRKSNASRRSFMMTPRPSNLTGAEIYSLSSSRNPTPRGSNFNHADFYSMMGYAPRHSNFGAADLYSVQSTSRGVTPRPSNFEENSAPAPQAISSPRFGFYPAVQTVPAAYPAPNPEFSSGLTKSVSKNSQTQPQPQSQPQAQAQAPQVAQPPNSSNKASHDAKELHMFVWSSSASPVSEAGGLHVFSGADFGASDQSGRSDQGAKEIRMLVADEHPQNGEANKAAAEGEFRGEDLKFPGKEGEQAEEEAEKAGVAGSNKLGSSSTAELHPKSGVAVAGKHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGVIWSLVAFRWHVHMPKIIEKSISILSDAGLGMAMFSLGEWPAVVGTCTIFGPGLGKGLFMALQPNIIACGNSVATFAMAVRFLTGPAVMAAASIAVGLRGTLLRIAIVQAALPQGIVPFVFAKEYNVHPAILSTGVIFGMLIALPITLVYYILLGL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02596 672 MobiDBLite consensus disorder prediction 275 298 - -
Vimu11g02596 672 MobiDBLite consensus disorder prediction 316 366 - -
Vimu11g02596 672 Pfam Membrane transport protein 9 554 IPR004776 GO:0016020|GO:0055085
Vimu11g02596 672 Pfam Membrane transport protein 573 667 IPR004776 GO:0016020|GO:0055085
Vimu11g02596 672 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 672 - -
Vimu11g02596 672 MobiDBLite consensus disorder prediction 275 296 - -
Vimu11g02596 672 NCBIfam auxin efflux carrier 1 554 IPR014024 -
Vimu11g02596 672 MobiDBLite consensus disorder prediction 322 363 - -
Vimu11g02596 672 MobiDBLite consensus disorder prediction 417 471 - -
Vimu11g02596 672 MobiDBLite consensus disorder prediction 431 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02596 Vimu-Chr11 46163283 46166756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g02596 1 672 Organic Solute Cotransporters AT1G70940 73.869 0.0 934
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02596 11 46163283 46166756 Vimu11g02596 11 46163283 46166756 ECH