Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02594 ATGGGAGAGGAGGTTGAAGAATCATTCAGCATGGAGTTTCAGGTAGATTCTATACATTCTGGTTCAATCTCGTTTGGGAGATTTGAAAATGAACCTTTATCATGGGAAAGAAGGTCCTCTTTCTCTCATAATAGGTACCTGGAGGAGGTTGAGAAATGTTCAAAACCTGGTTCAGTTATTCAGAAGAAAGCATATTTTGAAGCACATTTCAAGAAGAAAGGGATTTTTGGTATTATTCCATCCACAGTTCACGATGGATTATCATATAGAGCAGCCGGTGAAAGTGATGGCTCTGAGGGAATTGGTAAACAAGAGGATTTTGAGTCTAATAATGACCACTACGTCCCATTTGACGAAATGTCCCAAAAGGAATTTGAGTTAGAAGAAGGTGACAATTATGTTGAAATGGATCCAAGATCCGAAGAAGATGTCATCCCAATTGAAGAAAACCATTATATTCAATTTCGTGGAATTCCTGATGGTTCAAATTATCATGGAGAATGTGATGTGAACGAATATGAAGAAGAAGAGACCATCGAAGAATACCCAATGCTTTCATTTTCAAGTCTCGAGGTGGAATCTGTCATAAATAATTCTAATCATCTGGAGGATGCCAGTGAGAACAATAGTACTTTGAATGAAGCTCATCGATCTGAAAATCAAACAAGTGACATACTCTTAGCTAATGACGAGGCGGTTATGGAAGTGGAAAAGGATGATGATGTTACTGTAAATACTGATGAATCATCAATAAGCATGAGTATAACTGTGAATGAACCAGCACAGGGTGTTGAGGAAACAACTATGAATTCTCTTGCAAAACCTTCTCCTGAGGAAACAAAGCTCAAGACTCAACAGAATTCTGAAATGAACAATGTTGGAGTTCAGGGAAGCACGGTTACATCAGCTAAGGATCCTGCTAGGCATCCCAGTAGAGAGAGTCCAAGGAGAACAAATATGGAAAAGAATTTACCAAAACTTGCAACTCCAACTAGCAAAACTTCCAAAGAAGGTCTCGATTTGCAGGTTTCCAAAAGCGCAGAGAAACAAATTCGTGAAAGCAAAAGGTTGAACCAAGCTTTTGATTCTATGAAGTCCAATGTTAAGCCTAAGGCTGCAACTTTTAACTTTAAATGTAGTGAGCGAGCAGAAAGGAGGAAAGAGGCAAGTAAATTCTACATGAAGTTGGAAGAAAAATTGCATGCAAAGGAAGCAGAGATTACTGAGATGCAAGCAATATCACAGGAAAAGACAGAAACTGACATTAAAAAACTCCGAAAGAGCCTCAACTTTAAAGCAACACCAATGCCTTCTTTCTATCGCACAACTCTGTCTTTACAACCACATGGCAATAAGGTTGTGTCAAATAACACCAGAAGTAAGAAAGAACAGAATAAACCAAAATGTTCAACGAGTGGATCAGATGCAACAGTTCCTCCGAAATCAAAGGTGGGAAACAATCTGGATACTGGTGAATCGATAACAGTGAGAGAACCACATGATATCTCAGTCAAAGAGTGTGCCAAAAGTAAAGCATCTGAATCTAGTTTGATTTCTCCTGCTGCATCAACCAACCATAGACACGTTGCTAATTCTATGACAAGTAATCATGCTTCTGGAAAGAAAGAAGGAGCAAAGGTTTCTTCACAAAAACAGAAGGTATCAAATAGTTGTAAAGGAGCAAAACAACAAAACAACGAAAGAAATAAAAACGGTGAAACCACAAAACACAGAAATGATATAATGAGAAAAGGTGTGAGGAATGTTGGCTTGAGAAACATTTCCAAAAGTGGTAATTTTATTGTACATGTTTCCTCTTAA 1821 0.3806 MGEEVEESFSMEFQVDSIHSGSISFGRFENEPLSWERRSSFSHNRYLEEVEKCSKPGSVIQKKAYFEAHFKKKGIFGIIPSTVHDGLSYRAAGESDGSEGIGKQEDFESNNDHYVPFDEMSQKEFELEEGDNYVEMDPRSEEDVIPIEENHYIQFRGIPDGSNYHGECDVNEYEEEETIEEYPMLSFSSLEVESVINNSNHLEDASENNSTLNEAHRSENQTSDILLANDEAVMEVEKDDDVTVNTDESSISMSITVNEPAQGVEETTMNSLAKPSPEETKLKTQQNSEMNNVGVQGSTVTSAKDPARHPSRESPRRTNMEKNLPKLATPTSKTSKEGLDLQVSKSAEKQIRESKRLNQAFDSMKSNVKPKAATFNFKCSERAERRKEASKFYMKLEEKLHAKEAEITEMQAISQEKTETDIKKLRKSLNFKATPMPSFYRTTLSLQPHGNKVVSNNTRSKKEQNKPKCSTSGSDATVPPKSKVGNNLDTGESITVREPHDISVKECAKSKASESSLISPAASTNHRHVANSMTSNHASGKKEGAKVSSQKQKVSNSCKGAKQQNNERNKNGETTKHRNDIMRKGVRNVGLRNISKSGNFIVHVSS 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02594 606 MobiDBLite consensus disorder prediction 204 224 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 509 568 - -
Vimu11g02594 606 Coils Coil 386 413 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 324 341 - -
Vimu11g02594 606 Pfam Targeting protein for Xklp2 (TPX2) domain 375 443 IPR027329 -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 505 584 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 469 491 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 569 584 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 442 491 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 259 351 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 91 110 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 442 458 - -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 306 320 - -
Vimu11g02594 606 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 5 514 IPR044216 -
Vimu11g02594 606 MobiDBLite consensus disorder prediction 259 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02594 Vimu-Chr11 46123416 46129965 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02594 11 46123416 46129965 Vimu11g02594 11 46123416 46129965 ECH