Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02218 ATGGAGAGTAGCGAGGAAGAAGATGACTTCCCTTCCATCGAGAGCATCATCCCCCAATCAAAGGTTGACTCTCTCTACCAGTCCCACACCGAAAAGGGGATCAGGAAGCTTTGCTGCGAGCTTCTAGATTTGAAGGATGCTGTGGAGAACTTGTGCGGCAATATGCACTCCAAGTTCTTGGCTTTTTTGAGAATATCTGAAGAGGCCGTGGAAGTCAAGCATGAATTGATTGAGCTGCAAAAGCATATCTCAGCACAAGGTATTATTGTTCAGGATTTGATGACAGGTGTGTGCAGTGAATTGGAAGAGTGGAATCAGTCGAGCAATGATGTTACTGTAATTCGACAGGAACATGAACTGCCTGAATTACTTGAGCCATTACCAAATGAGCGTAATGACCAGAAAATATTATTCTTGGAAAACATAGATGTACTTGTGGCTGAGCACAAGTTTGAAGAAGCATTGGAAGCATTAGAAGCTGAAGAAAAAAATTCTGGTGAGTTGAAAGGCTCAGGAAATAACTCTTCAGATGATGTTTCCTCATATAAGTCTGCTTTGTCAGAAAGAAAAGCAATGCTTGAACAACTGTTAGTTGGAATTGCTGAACAGCCGTCTATTAGTTTCCCTGAGCTGAAGAAAGCCTTAAATGGTTTAATAAAACTTGGAAAAGGTCCTCGTGCACATCAAACAATGCTGAAATTTTATAAGTCTCACCTCCAGAAGAGAATTGAGGCTTTTCTTCCCTCAAGTTCTCTCTGTCCTGAAACATTTCCTTCTACGTTATCTAAGATTGTGTTTTCTGCAATATCACTGACAATAAAGCAATCTGCTTTGATTTTTGGAGATAATCCTGTTTACACCAACAGAATTGTTCAGTGGGCAGAGTGGGAAATTGAATATTTTGTTCGAGTGGTGAAAGAGAATGCTCCCTTATCTGAGACTGTTTCTGCCTTACGTGCTGCATGCATTTGCACTCAGGCTAGTCTGAACTATTGCTCAATTTTGGAGTCACAAGGATTGAAAATGTCTAAATTACTGCTGGTGCTTCTCCGTCCTTCTGTTGAAGAAGTTTTAGAATCAAATTTTAGACGTGCTAGAAGAGTAGTTCTTGACATTGCTGAATCTTCTGAATGTTGCCCATTGTCACCACTGTTTGTATCTTCACTTTCTTCAATTGCCACTTCATCTAGTAGTATGCTTGTTGAGAGTGGAATGCGATTTATGCACATAGTTGAAGAGATATTGGAACAGTTAACGCCATTGGCTAGGTTGCACTTTGGGGGAAATGTACTGAATAGAATCTCACAACTGTTTGATAAATACATGGATGCTCTTATTAGAGCATTACCCGGTCCTTCTGATGATGACAATCTTCCAGAACTAAAAGAGGCCGTGCTTTTCAGAGCTGAGACTGACTCTGAACAACTTGCAATATTGGGAATAGCATTTACGATATTGGATGATCTGTTACCAAATGCTGTGTTATCAAGGTGGATGCTGCAAAGTGAAGGCAAAGAAACAAATAGTGGATCAACAGAGAATCTAACCTTCAATACAAATGCTAGTGTAGAATTGAAGGAGTGGAGGAAGCATCTTCAACATTCTTTTGACAAACTTCGGGATCACTTCTGTCGGCAATATATTTTGACTTTCATCTACTCGAGAGAGGGGAAAACGCGGTTGAACGCACATATTTACTTGGGTGATAACAAAGAGGATAATTTCTGGGATTCTGAACCGCTTCCTTCGCTTCCATTTCAGGCAATTATTCTTATTTTTCTGCCTTTTCTTTATTTGTTCACTAATTCCTTGCATTATGCCATTTTACTGAGGTGTGTGGCTGGGCATCTGTTGGCATTATTTGCAAAGCTGCAGCAATTAGCAATTGTGGCTGGGGATGTATTAATTGGGAAAGACAAAATACATAAAATTTTGCTTGCTAGGTTAACAGAGACTGTTGTGATGTGGTTGTCGGATGAGCAGGAGTTTTGGGGTGTGTTAGAGGATATTTCAGCTCCTCTACAGCCACTTGGTTTGCAGCAGTTAATTCTTGATATGCACTTTACTGTTGAAATTGCACGCTATGCGGGGTATCCATCTCGCCACATCCATCAGATAGCATCAGCTATCACCGCTCGTGCCATCCGGACCTTCTCTGCTAGGGGCATAAACCCTCAAAGTGCACTTCCCGAGGATGAATGGTTTGTGGAAACTGCAAAGTCAGCAATACACAAGTTCCTGCTTGGGGCATCAGGATCGGAGGCATCAGACACTGATGAAGATCATATCATTGTTCATGATGAAGTTGTCTCCGACTCTGATACTGTTTCATCCCTATCTTCTACGGATTCAACCGAGTCTTTTGCTTCTGCTAGCATGGCCGAACTTGACAGCCCCTCCAACTTGTCTGATCCAGATAATTGA 2424 0.4138 MESSEEEDDFPSIESIIPQSKVDSLYQSHTEKGIRKLCCELLDLKDAVENLCGNMHSKFLAFLRISEEAVEVKHELIELQKHISAQGIIVQDLMTGVCSELEEWNQSSNDVTVIRQEHELPELLEPLPNERNDQKILFLENIDVLVAEHKFEEALEALEAEEKNSGELKGSGNNSSDDVSSYKSALSERKAMLEQLLVGIAEQPSISFPELKKALNGLIKLGKGPRAHQTMLKFYKSHLQKRIEAFLPSSSLCPETFPSTLSKIVFSAISLTIKQSALIFGDNPVYTNRIVQWAEWEIEYFVRVVKENAPLSETVSALRAACICTQASLNYCSILESQGLKMSKLLLVLLRPSVEEVLESNFRRARRVVLDIAESSECCPLSPLFVSSLSSIATSSSSMLVESGMRFMHIVEEILEQLTPLARLHFGGNVLNRISQLFDKYMDALIRALPGPSDDDNLPELKEAVLFRAETDSEQLAILGIAFTILDDLLPNAVLSRWMLQSEGKETNSGSTENLTFNTNASVELKEWRKHLQHSFDKLRDHFCRQYILTFIYSREGKTRLNAHIYLGDNKEDNFWDSEPLPSLPFQAIILIFLPFLYLFTNSLHYAILLRCVAGHLLALFAKLQQLAIVAGDVLIGKDKIHKILLARLTETVVMWLSDEQEFWGVLEDISAPLQPLGLQQLILDMHFTVEIARYAGYPSRHIHQIASAITARAIRTFSARGINPQSALPEDEWFVETAKSAIHKFLLGASGSEASDTDEDHIIVHDEVVSDSDTVSSLSSTDSTESFASASMAELDSPSNLSDPDN 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02218 807 Gene3D - 137 245 IPR042561 -
Vimu11g02218 807 MobiDBLite consensus disorder prediction 162 181 - -
Vimu11g02218 807 FunFam Exocyst complex component EXO84C 138 245 - -
Vimu11g02218 807 PANTHER EXOCYST COMPLEX COMPONENT 8 4 790 IPR033961 GO:0000145|GO:0006887
Vimu11g02218 807 MobiDBLite consensus disorder prediction 771 807 - -
Vimu11g02218 807 SUPERFAMILY Cullin repeat-like 138 358 IPR016159 -
Vimu11g02218 807 Pfam Exocyst component 84 C-terminal 139 341 IPR032403 -
Vimu11g02218 807 Coils Coil 144 164 - -
Vimu11g02218 807 MobiDBLite consensus disorder prediction 167 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02218 Vimu-Chr11 38738967 38748305 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02218 11 38738967 38748305 Vimu11g02218 11 38738967 38748305 ECH