Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g02199 ATGGGCTTGAAAGATAAGCAAAACAATGCTGATGGGAAAGACCCGGATTTTGGAGCAATCTTTATGTCAAATAGTGAGACTAAAAGAGAATGCTTCGAAATGGGACTGTTTGGCCTCCCATCAACTGAAATCCAGTTTGTAGAGCAGGTTAAAGCTGGAATGATTCTATTCTTATTTGAAAATGAGAAGAGACAACTTCATGGTGTGTTCAACGCTTCCTGTGATGGAGGTATCAATATTGTGCCTAATGCATTTGCGAAACAGGGGAAGCGATTTCCTGCTCAGGTTAAGTTTGATATAATTTGGTTCTGTAAGCCACTCCCAGAAAAATTATTCCGTGATGCAATCAGAGAAAATTACTTTTCAGCTAACAAGTTTAACTTTGGTCTATCTGAAAATCAGGTCTATAAACTTATATATTTGTTCAGCAAGAGAAAGCTGGAACCAGAGCTCCCTGGGAGACCATTGTCCAGAACCGAATACTTGAAATCAGAAAGGTACCCTTTAGGCAATTTAAGAAGATCTGTTGATCATGGAATGCAAATTGAAAGAGGTCAAAGTGGGCAAGGTTTGGGTGATAACATATCACCTGTCATAATGCATAAACACCAAGGCGATTCTCTTGATTACAATGGTAAAGTTGAATATACTGGATTAAATGCAAGTGATATTAAGCGAGGAAGGGCTGCTCAGTTTGCTGCGGTGGATAATGCAAGTGAGTATGTTTGTGACTGTTCAGGATTAAAAGATGAACGTAGGTTTATTGCATATGAGAATGAGGATTATATGGATACCTGTCACAGGCCAAACACAGATGGTGGATACCCCAAAAGTCTATGTGATAAAATTAGAATTCATGGTGAGGGAAGCTTATCAATTAATGATAGGCTCATGGGTAATTCCCTTCCAGAGACGAATCAGAGGATGGTATTTTCAAATGACATTCCTGGTCAACATAATTCCCATATCAACTCATCTGGCTTTTACAGCAATCCTATTTTGGAGCATAGTTCTTTGGCTCAAAATCAGCTTAGGCCAACTTCAACCATGGTTCAACCAATGCAGGTACAGCTCTTAAGTAATACATGTGCAACACAAGGAAGTGCTAATTCTAAGAGGGAATCCCTTCTATATGATCCAGATGTTCCTGGTTTAAATTTTAGTCAGGCATCATCTTTTGGAGTTATTGATGGTTCTAAGCCAGTAATAGAAAGAATTACCCCTGTAAACAACTTCGGAAGGAATTCCCTGAACAGTCAACCATATCTCATCCAAAATAACGAGCTGAGAGATACGAGAAGGTGGCACCCTGTTGACTTTCAAAATTCTATTTTGTATAGTAGCAACAGGGATTTCATACCTCTAAACACGGTTCAAAATTCTGACCAGTTGGCAGCAGAATCTGTTGTTTCTGAGGCTTGTGATGATGTTCCGTCCTTAAAGTCTTTGTCATCCCCTATCCCTCCAGATATTGGAAAGAGTAGCCGCAGTCTACATGAGCCCTTTTCTTCCTTGTTCCATAATCACCAACCGTGGTTAGGCAACAAATTTCATTCCACAACTTTGCAAGAAAACCCAAGCCATGAGATAACACTACAGAAAAGCAACGAAACATTTACTCATGATATTTCATGGGAAAATGAGGGTCATTTCAAAGAGGATGATCCAATAATCTATGAATATGATATTGGATGTTATGGTGGCGCTCAAAATAATAATTCTGGTTATGCAAAGCAAAAAAGTAGTGTTTTTTCTCGATTATCTTTTATGCAGGATATCAACGAACAAGATGGACACAATGATTTCCATACTTCAGTTGATGAAGTGATGAAAAGGGTTCGGCAGATTCACAAAAAGTGGATGACAAAAAGAAAGCTCAAGCCCAAGCGCAACAAAGCTGAAAGTTTGAAGGATTATACTCAAAGAAGTAGCTTGAGGACGAAGGAGGGTGATTTCACTGAAAATACCTTGAATGATCAAATAATGGATTCAACTACTGCAACTGTGGGCAATACTAACAAAACAGCCGAAGACACATGTTTTGTGGATTTCAAGCGGCGTAGCAAAGTCAGGAAACCTAGTGCTGGAAATGAGAATTCGGTGGTTGGGCAACAAAAGAGAAGAAAGTTGATCCGCCCAAATTTCAGCAAGAGTGTAACTTCTGATGATAAGGTCATTGATCTCGATGCTTCTCAAAACTTACGACTTGGAAGTTGTAGTGTTGAGGATGTTAAGGAAAGCTGCTGTGCTTTGGTTCAAACTGAGGTTGACACTAAGGCAGGTGCTGAAGTAAGAGACATTATTAGTGAAATACATTCTGATGACAAGAATAGTTGTCGTGCTAGGGGATATGCAAGCAGTGATGGAGGAGAAAGAGCATCCGATAGTGCTCTTGCTGTATTTAATGATAAGTCAGAATGTCTGGATGGCATTAAAGCAGATACTAATATTCAAAACATTAATGGTGGAACACATACTGAAGATAAGGAAACTAGTCATGCCAGGGGATATGTCTGCGATGAAGGAGGACAAAACGCAAACGGTGGTGCTCTTACTGCATTTAGTGATGAATCAAAATGTCCGGAGAACGTAACCCACAATATTTTTTCTTCAGCTTCTTGCAGAGGCAATAGATGTCATACCAAGAAAGGTTTATGTACGATGGATATTATAAAATCAATTTCTCTGAACTCAGAATCATCGTTTTCAATTTGTCAAGACCATCAGGTGCATAAGATCGTATGTGCTGGCAGAGGTACCAATGCTGACAAAGAAATCCCCCAAGAGTGCAGCTTTACTATTGCAGTTAAAGATGGTTCTGAAAAGGTTCTAATTGAAACTTGTGCTCCTATAAATGAAAGTTTACATGGGATTGATAGTTTAAAGCAAGTACATGAAGGTACAGACTCAATGTGTTCAATATGTCAAGAGCACGATACTGGTAAGATCACTTCCTCTGGCGGAGGAAGTGATTCTAGAGAACAATTGTCGAAAGATGGCAGCTCCTTCGATGCAGGAGTTAAAGATGGATTGGACTGTTTACAGAACTCCAACATTGGAAGTGGTGCAATTGTTCCTTCTTTTTTCGAGGAAGTCTTATCTATGACTGGGAGTAAAAAGTCAGTATGCTCAGATTCAGAATCACTGCCTTCTATATGTCTAGAATGTCGTGTTGACAAGGGTAGATGTGCTGGCAGGCCTATTAATAAGACTGAGGATTGTAGATCCTCCGTTATTACTGAAGTTAAAGATGGATCGGACGGTTCACAGGACTGTGACTACTATACTTGTAAACAAAAGATGATTTGA 3309 0.3941 MGLKDKQNNADGKDPDFGAIFMSNSETKRECFEMGLFGLPSTEIQFVEQVKAGMILFLFENEKRQLHGVFNASCDGGINIVPNAFAKQGKRFPAQVKFDIIWFCKPLPEKLFRDAIRENYFSANKFNFGLSENQVYKLIYLFSKRKLEPELPGRPLSRTEYLKSERYPLGNLRRSVDHGMQIERGQSGQGLGDNISPVIMHKHQGDSLDYNGKVEYTGLNASDIKRGRAAQFAAVDNASEYVCDCSGLKDERRFIAYENEDYMDTCHRPNTDGGYPKSLCDKIRIHGEGSLSINDRLMGNSLPETNQRMVFSNDIPGQHNSHINSSGFYSNPILEHSSLAQNQLRPTSTMVQPMQVQLLSNTCATQGSANSKRESLLYDPDVPGLNFSQASSFGVIDGSKPVIERITPVNNFGRNSLNSQPYLIQNNELRDTRRWHPVDFQNSILYSSNRDFIPLNTVQNSDQLAAESVVSEACDDVPSLKSLSSPIPPDIGKSSRSLHEPFSSLFHNHQPWLGNKFHSTTLQENPSHEITLQKSNETFTHDISWENEGHFKEDDPIIYEYDIGCYGGAQNNNSGYAKQKSSVFSRLSFMQDINEQDGHNDFHTSVDEVMKRVRQIHKKWMTKRKLKPKRNKAESLKDYTQRSSLRTKEGDFTENTLNDQIMDSTTATVGNTNKTAEDTCFVDFKRRSKVRKPSAGNENSVVGQQKRRKLIRPNFSKSVTSDDKVIDLDASQNLRLGSCSVEDVKESCCALVQTEVDTKAGAEVRDIISEIHSDDKNSCRARGYASSDGGERASDSALAVFNDKSECLDGIKADTNIQNINGGTHTEDKETSHARGYVCDEGGQNANGGALTAFSDESKCPENVTHNIFSSASCRGNRCHTKKGLCTMDIIKSISLNSESSFSICQDHQVHKIVCAGRGTNADKEIPQECSFTIAVKDGSEKVLIETCAPINESLHGIDSLKQVHEGTDSMCSICQEHDTGKITSSGGGSDSREQLSKDGSSFDAGVKDGLDCLQNSNIGSGAIVPSFFEEVLSMTGSKKSVCSDSESLPSICLECRVDKGRCAGRPINKTEDCRSSVITEVKDGSDGSQDCDYYTCKQKMI 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g02199 1102 ProSiteProfiles DCD domain profile. 14 144 IPR013989 -
Vimu11g02199 1102 MobiDBLite consensus disorder prediction 622 655 - -
Vimu11g02199 1102 SMART dcd 13 144 IPR013989 -
Vimu11g02199 1102 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN-RELATED 7 712 - -
Vimu11g02199 1102 MobiDBLite consensus disorder prediction 631 653 - -
Vimu11g02199 1102 Pfam Development and cell death domain 18 142 IPR013989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g02199 Vimu-Chr11 38435862 38439362 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g02199 11 38435862 38439362 Vimu11g02199 11 38435862 38439362 ECH
Vimu11g02199 11 38435862 38439362 Vimu7g00211 7 2624168 2626743 PCT