Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01668 ATGGAAAGCCATGTCCAGCACCCTTCGTTAAACGACGTCGTTGTCAACGTCAATGACGACTCTGATTCTGATGCTCGCCGCCTTCACCCAACTGACCATGCATTTTCCTCTCAGCAGCAACAACAACAACGACAGGAAGGGAAAGAAAGAAGGGAGAGTTTGGTTCTTGCGTACAAGACTCTTGGGGTGGTGTTTGGAGGACTTGTGACGTCTCCCCTCTACGTGTACCCTTCAATGCCACTCAAGTCTCCAACGGAAGATGACTATTTGGGCATTTACAGCATTATGTTTTGGACTCTTACCCTCATAGGGGTTGTCAAGCATGTCAATATTGGGATCCTGCCTCCCAAGCATGTGGGTTTGAACACAACTAAGGATGTTCAGAAGAGAACTTTGCTTGCCAAGTTCTTCCAAACAAGCTTAGTTGCACGGAGGCTATTGCTCTTTGTTGCTATGTTGGGTACTTGCATGCTTATTGGTGATGGTATACTTACGCCAGCAATTTCAGTGTTGTCAGCTATGGATGGACTTAGAGCACCTTTTCCTTCAGTTAGCAAATCGCTAGTGGAAGCACTCTCTGCAGTAGTGCTCATCGTTCTGTTCCTGTTGCAAAAGTTTGGTACATCCCGTGTTAGTTTCCTATTTTCCCCAATAATGGGCGCATGGACCCTGAGTACCCCAATTGTAGGAGTTTACAGCATCATTCATCACTATCCTAGCATATTTAAGGCTTTATCTCCCCACTATATATTCTACTTCTTTTGGAGAAATGGAAAATCTGGATGGCTTTTACTTGGTGGTACTGTACTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTCAATCCGAAGTCCATTCAGATAGCTTTTCTGTTCACAATCTACCCATCTTTAGTTCTGACTTATGCGGGACAGACAGCTTACCTGATCAAGCATCCCAATGATCATGATGATGGCTTCTACAAATTTATACCAACTTCAGTCTACTGGCCCATCTTTGTCATTGCCACTTCTGCTGCAGTTGTTGCTAGCCAATCATTAATATCAGCCACCTTTTCTGTAATCAAGCAATCAGTAGTTCTGGATTATTTTCCTAGAGTAAAGGTTGTCCACACATCTAAAAATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTGATGGTCCTTTGCGTAGCTGTGATTCTTATTTTTGGAGATGGAAAAGATATAGGAAATGCTTTTGGTGTTGTTGTGAGCCTAGTTATGCTTATCACCACCATATTGCTTACACTAGTCATGATCATGATATGGAGGACTCCTGCTGTGCTAGTTTGCCTTTACTTCGTTGTATTTTTTGTGATGGAAGGGGTTTATGTTAGTGCAGTTTTCACCAAATTTGCTGAAGGTGGATGGATTCCTTTTGCCATATCATTCATCCTTGCTTTCATCATGTTCGGTTGGTTTTATGGTAGACAAAAAAAGACTGATTACGAATTAACCCACAAGATAACCTTTGAGAGACTTCAAGAGCTTTTAGCTGACCGCAGTGTTAATAGGGTTCCTGGGCTATGCTTCTTTTATACCAACATTCAAGACGGGTTGACTCCTATTCTTGGACACTACATAAAGAACATGAAATCCCTTCACAAGGTCACAGTATTCACAACTCTTAGATATTTGTTAGTTCCAAAGGTTGCTCCACAAGATAGGATCGTAATCAAAAAATCAAATCTCAAGGGGGTATATTGCTGTATGATTCAGTATGGCTATGCAGATGCTCTAAATTTGGAAGGAGATCATTTTGTTGACCAAGTCATTAGTAGTTTGGGAAAACATATACAGAAGCATCAGTCTCCAGAGAATCTTTCTGATTCTGAAGAGACTGACGAAGAGACTTCGAACTTAGAAGAAGCAAGGCTTTCTGGGGTAGTTCACGTTCGTGGAAAGACCAGATTTTACATTGGCCAAAACTGTAGCTGGTTTGATAAATTTGTGCTTAGTTTTTATGAAGTTATGCACAATAACTGTAGATCTGGTTTGCCTGCTCTTGGGATTCCACCGCAGCAACGGATTGAAGTTGGGATGCTATACGAAGCTTGA 2100 0.4181 MESHVQHPSLNDVVVNVNDDSDSDARRLHPTDHAFSSQQQQQQRQEGKERRESLVLAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKHVNIGILPPKHVGLNTTKDVQKRTLLAKFFQTSLVARRLLLFVAMLGTCMLIGDGILTPAISVLSAMDGLRAPFPSVSKSLVEALSAVVLIVLFLLQKFGTSRVSFLFSPIMGAWTLSTPIVGVYSIIHHYPSIFKALSPHYIFYFFWRNGKSGWLLLGGTVLCITGSEAMFADLGHFNPKSIQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPTSVYWPIFVIATSAAVVASQSLISATFSVIKQSVVLDYFPRVKVVHTSKNKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAVLVCLYFVVFFVMEGVYVSAVFTKFAEGGWIPFAISFILAFIMFGWFYGRQKKTDYELTHKITFERLQELLADRSVNRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTVFTTLRYLLVPKVAPQDRIVIKKSNLKGVYCCMIQYGYADALNLEGDHFVDQVISSLGKHIQKHQSPENLSDSEETDEETSNLEEARLSGVVHVRGKTRFYIGQNCSWFDKFVLSFYEVMHNNCRSGLPALGIPPQQRIEVGMLYEA 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01668 699 Pfam K+ potassium transporter 58 592 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g01668 699 MobiDBLite consensus disorder prediction 1 18 - -
Vimu11g01668 699 MobiDBLite consensus disorder prediction 1 49 - -
Vimu11g01668 699 NCBIfam potassium uptake protein 122 698 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g01668 699 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 127 698 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g01668 699 MobiDBLite consensus disorder prediction 616 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01668 Vimu-Chr11 20987315 20991893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01668 2 698 Inorganic Solute Cotransporters AT4G13420 35.459 8.34e-164 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01668 11 20987315 20991893 Vimu11g01668 11 20987315 20991893 ECH