Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01649 ATGATAGCACGTTTGTTCCATGCTGAAATTGGAGAAGATGAGAATGCTATTGGAGCAGGAACTGTTGGCTCATCAGAAGCAATAATGCTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAGCGTAAGGCAGAAGGCAAGCCTTATGATAAGCCTAATTTGGTCACTGGCTCCAATGTACAAGTATGTTGGGAGAAATTTGCGAGATATTTTGAGGTGGAGTTGAGGGAAGTGGAGGTCAGAGAAGGATACTACGTTATGGATCCCGCCAAAGCAGTCGAGCTGGTTGACGAAAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACTTACAATGGAGAGTTTGAAGACGTGAAGCTCTTGAATGACTTGCTGCTACAAAAGAATAAGCAAACTGGGTGA 405 0.442 MIARLFHAEIGEDENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVELVDENTICVAAILGSTYNGEFEDVKLLNDLLLQKNKQTG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01649 134 PANTHER GLUTAMATE DECARBOXYLASE 1 134 IPR010107 GO:0004351|GO:0006536|GO:0030170
Vimu11g01649 134 Pfam Pyridoxal-dependent decarboxylase conserved domain 2 128 IPR002129 GO:0016830|GO:0019752|GO:0030170
Vimu11g01649 134 SUPERFAMILY PLP-dependent transferases 1 133 IPR015424 -
Vimu11g01649 134 Gene3D - 1 134 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01649 Vimu-Chr11 20541251 20541655 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01649 1 134 Calmodulin-binding Proteins AT2G02010 82.090 3.51e-77 236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01649 11 20541251 20541655 Vimu11g01649 11 20541251 20541655 ECH