Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01590 ATGTGTTTGAGTGTTTCAAGATCAATGAGATTCTTAGCGGTGTGTTTTGTCTTCTTATTTATGGTGCTACAAGTAGCAGACACCAGATGTTTCGCTTTCAGCAAGGAAAAAAAGCTGTCAGAATTCAGGGCCAAACTTGATCGAAAGATTCAAGATTTAGCTGCAACTCCTTCGGCATCACCACCCGCTTCATCAGAAACAAAGAGGAGAGGGAGAGTGTTGTACGTGAGTGAGTATGGTGCGGATCCAAGTGGAAATGAAGAGAGTGGTGATGCCATTTTGAAAGCAGTGGAAGATGCTTTTGGTTTGCAGAAGGGTTATGAGATGGTTGCAGGGGTGAATGACCTTGGAGGGGTTGTCATTCATTTGGAAGGTGGAAACTACAAAATCAGCAAACCCATCACATTCCCTTCAGGTGTTGGCAATATTGTGGTAAGAGATGGAACGTTGAGAGCATCTGATAAATTTCCTGGTGATAGACATCTAGTTGAGTTATGGTCATCAAAGACTGAGAAACAAGGCAATGGTGGAATTTACTATGAAGACATAACTTTCAGGGACATTCTCTTTGATTCAAGCTATAGAGGAGGAGGGATATTGATCGTTGATTCTGCTAGAATCCGGATCAACAATTGCTTCTTCCTTCACTTCACCACAGAAGGAATTCTGGTCCACCAAGGACACGAGACCTTCATCACATATTGCTTTCTTGGACAACACTCAACCGTCGGAGGAGACAAAGATGAGAAGAACTTCTCAGGGATAGCCATTGATCTTGCTAGCAATGATAATGCAATCACAGATGTTGTAGTTTTCTCAGCAGCCATTGGTGTTGTTCTAAGGGGTCAAGCTAACATTTTAACTGGGGTGCATTGCTATAACAAGGCAACAGGTTTTGGTGGCATAGGGATATTAGTTAAATTGCCTGGTAATTCTATGACAAGAATTGACAATTGTTATATGGATTACACTGGAATAGTTATGGAAGATCCAGTTCAAGTTCATGTCACAAACGGGTTTTTTCTCGGGGATGCTAATATTGTATTGAAGTCTGTTAAAGGTCAAGTTTTGGGTCTAAATATAGTGAATAACATGTTCAATGGTGACCCCAAAAGGAAGGTTCCTATTGTAAGTCTAGATGGGGAATTCAGTAGCATTGATCAAGTGCTGGTTGATCACAACCTTGTCAATGGGATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGTCAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCGGTTTTGGTGTTTCCTAAGAGAATTAACCATTTTCAATTTTCATTTTATGCTCAAGATGAGCCTAAGTTTGTAGCATTTTCTGTGACCAATGTGTCAGATAACGTTGTTGTTGTGGAGAGTGAGAAAGAAGCGAAAGGGTCTGTTTCCTTCACAGTTGAACAATAA 1434 0.41 MCLSVSRSMRFLAVCFVFLFMVLQVADTRCFAFSKEKKLSEFRAKLDRKIQDLAATPSASPPASSETKRRGRVLYVSEYGADPSGNEESGDAILKAVEDAFGLQKGYEMVAGVNDLGGVVIHLEGGNYKISKPITFPSGVGNIVVRDGTLRASDKFPGDRHLVELWSSKTEKQGNGGIYYEDITFRDILFDSSYRGGGILIVDSARIRINNCFFLHFTTEGILVHQGHETFITYCFLGQHSTVGGDKDEKNFSGIAIDLASNDNAITDVVVFSAAIGVVLRGQANILTGVHCYNKATGFGGIGILVKLPGNSMTRIDNCYMDYTGIVMEDPVQVHVTNGFFLGDANIVLKSVKGQVLGLNIVNNMFNGDPKRKVPIVSLDGEFSSIDQVLVDHNLVNGMSLRSTVGKLTVSGNGTKWVADFSSVLVFPKRINHFQFSFYAQDEPKFVAFSVTNVSDNVVVVESEKEAKGSVSFTVEQ 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01590 477 PANTHER POLYGALACTURONASE QRT3 16 477 IPR039279 GO:0004650
Vimu11g01590 477 SUPERFAMILY Pectin lyase-like 72 398 IPR011050 -
Vimu11g01590 477 Gene3D - 76 468 IPR012334 -
Vimu11g01590 477 FunFam Polygalacturonase QRT3 76 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01590 Vimu-Chr11 19267590 19270451 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01590 11 19267590 19270451 Vimu11g01590 11 19267590 19270451 ECH