Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01581 TTGGTGATGGAGATGAGTATGTTGGCTCCTTCCTTCCCTGGCTTCGCTAAACCCTCTGCAACTGTAAAACCTTCTCTTCTTACGCTCAGGGCATCTTCTCTGCGCCATGACTACCCTCTTGCGAGCAAAATTGTTGTTAAAAGTAATATTCGTTCTCACCCTCTTACCCTTCAGTTCCATTTAGTTGAAGCATCACTCAGGTTAGATGTCATTGTCAACTGTTATCTACCGTTGCCAGCTCTAGGCAATGTTCTTTGTCCTACTTGGTTTGAGACATTCAGTATGAGCCTCTTGGGCCTTGTGCTCCATTTTCGCAACTGGACTTACTGTCTATGTTTGGGTTTTATGACAGGGACTAAGGCCAGGATATTGCATCTTACATACTTTTTTACATCAATTTCTACTTGTTTTTATCTGGAAGCAGATTTACCATATTCTACTGGTGAGACTACTTTGCAAAAGGAATTTTCTAATTTTGGAAAGATAGCTGAAGTTAAAATGGTTAAAGATGTGAAAACAAAAAGATCCAAGGGTATTGCTTTCATTCAATATACATGCCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGATTTTTATGGTCGAACAATCTATGTGGAAATTGCTAGATTGGGTTGGGATTATTTTGGTGCAACCCCAAGGGCCTCAGGACCCCCAAAGAAGTGGGATTTGCCAGAGCAAGAAGAAGTGGTAGATTGTTGGTACTGA 738 0.4119 MVMEMSMLAPSFPGFAKPSATVKPSLLTLRASSLRHDYPLASKIVVKSNIRSHPLTLQFHLVEASLRLDVIVNCYLPLPALGNVLCPTWFETFSMSLLGLVLHFRNWTYCLCLGFMTGTKARILHLTYFFTSISTCFYLEADLPYSTGETTLQKEFSNFGKIAEVKMVKDVKTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIYVEIARLGWDYFGATPRASGPPKKWDLPEQEEVVDCWY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01581 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 142 214 IPR000504 GO:0003723
Vimu11g01581 245 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 141 233 - -
Vimu11g01581 245 SUPERFAMILY RNA-binding domain, RBD 142 214 IPR035979 GO:0003676
Vimu11g01581 245 SMART rrm1_1 141 210 IPR000504 GO:0003723
Vimu11g01581 245 Gene3D - 141 236 IPR012677 -
Vimu11g01581 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 142 207 IPR000504 GO:0003723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01581 11 19161418 19167217 Vimu11g01581 11 19161418 19167217 ECH