Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01568 ATGGCGAGAAACTGGTTGTTTCGATCTTTGGCTCTTCGACATGCGATAAAGAATAGTGTTCGGCCAATCTTCTTCAGCGCTCACCACCGCTTTCTCTCACTCCCACCCAAACCATCTCTCTTTGCCACCGCAATTGCTTCCTCTCAACTCTCTCTCCTCCCATCCTTCCACCACTCCCGCTCCCTCTCCTCCGCCGCAGGTTCTTCTGATGTTGTACTTGTTAATTCAGAGGAAGAGTTCAACAACATCCTTACCAAAGTCAAAGATAACTCGTTGCACGCCGTCTTCTATTTCACTGCGGTTTGGTGTGGACCTTGCAGGTTTATTTCTCCTATAGTTGGGGAGCTCAGTAAGAAGTATCCTCATGTGACAACATATAAGATTGACATCGATCAGGAAGCAATTCAAGGCACATTGGGCAAATTGCAGATTACATCTGTGCCTACACTTCATTTCTTTCAGAATGGAAAAATGGCCGATGTTCTTGTAGGTGCTGATGTTGCGCGATTGACCAATATCACAGAGAAACTCTTCAAGTAA 540 0.4574 MARNWLFRSLALRHAIKNSVRPIFFSAHHRFLSLPPKPSLFATAIASSQLSLLPSFHHSRSLSSAAGSSDVVLVNSEEEFNNILTKVKDNSLHAVFYFTAVWCGPCRFISPIVGELSKKYPHVTTYKIDIDQEAIQGTLGKLQITSVPTLHFFQNGKMADVLVGADVARLTNITEKLFK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01568 179 PANTHER THIOREDOXIN 71 175 - -
Vimu11g01568 179 FunFam Thioredoxin 68 179 - -
Vimu11g01568 179 SUPERFAMILY Thioredoxin-like 62 169 IPR036249 -
Vimu11g01568 179 Pfam Thioredoxin 72 167 IPR013766 -
Vimu11g01568 179 CDD TRX_family 78 166 - -
Vimu11g01568 179 Gene3D Glutaredoxin 66 179 - -
Vimu11g01568 179 ProSiteProfiles Thioredoxin domain profile. 47 179 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01568 Vimu-Chr11 18949025 18958667 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01568 11 18949025 18958667 Vimu11g01568 11 18949025 18958667 ECH