Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01549 ATGATCCAGTATTACTATGAATGCGTGATCTGTGATGTTGGTGGCAACTTATTGTGCTGTGATAGCTGTCCTCGCACATATCATTTACAATGTCTTGATCCCCCCCTTAAGCGCATTCCTAATGGTAAGTGGCAATGTCCAAGTTGCTTTGAAGGAAAGGATCAACTAAAGCCCATAAACCACCTGGATCCAATTTCAAAACGAGCAAGGACAAAGACTGTCCCTACAAAATCAAAAGGCCAAATCAACTCACTTAACCTTGAAAAAGTATCTGGACTTTTTGGAAGCAAACTTATTTCAAAGAAAAGGTCCTCAAGTAAAGGGAAGTCTATTTCAACTGTGGGAGTCAAATTTTTTGGAAAGAAATTGTTGTCTTCCTCAGTTGATGAAACTGGTAGTGACAAACCTATTGACCCGTCTCTTGGGAGTCCTATGGAAGGAACTTCGTCATGTTTGGATGCTGATGAAAAGAAATCAAGCTTGTCCCCATCAGACTCCCCTGTGGACAGGAAGTCAACTTCACCAGCCAAGGTAGTTTTATCGCTATCTAAAATTACTGATTTAGAAGCAAAGGATGAACAACTAGAGGGTAAGACTTCTTCACCTTGCAATAAGATTCCTTTAAGGAAAACACTTGTTCTTGCTATTGCTGCTAATGGAGAGGACGTGAGAAAAAGGAAGAATAAAGTTGTTAACGATAATACTAGTCAAAAAAAGCAAAAGACTGAAAAGGGAAAAAAAATTGTCAATGCTTCTTCTACAAAGTCCAAGTCTGGGAATAATAAAGTACACAAGAAGCAGAAGTCTAGCATTTCTGCATCTATACCAAAAGAGGATGTTGGAAACAAGAATTCTCAAGTCCAGCAGAAAGATGAGAAGTTTTTTCGGGTAATGAAAGACACATCAAATGAACTGGATAAAGCACAAAATCTTGTAGATGAAACTTTGATTCACGAAGATAGTACCGTTGTTGAGTCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCATGGTGAGAATACAAGTTCATTACATAATTTGTCTTTGAACGTTGAGGGTGGCTCGCCTTCTGGTGATCTGGTCATATCAGAAAATCAGACCAGGCTTTTAGAGGATAATTCTACCTGTGCTAATGATTTGGATGTGGAATCAACTGAAGTTCAAGTTGACGATTGCCAAAATGTCATCAAGATTTCTGATGAAGAAGGAATGTTGATAAACACTAATAGAATGGAAACAATTCATGTATACCGAAGATCAGTAACGAAAGAAAGTAAGAAAGGAAATCCTATTGATTCATTGAGTAAAGCCACTGATGATTTAGGTTCCTGTGCCAGGGACGGTATAGATCAAGATGATTCTGCTGTATCTGCTGAACAGTTGAAAAAACCAAATGACAAGCTTGAGATAGAGGAGAGAATTAATGTTGCTTTAGGAAGCAAGGATAACAGTGAGCTTCCAAAAAGTTGTGAAACACATGATGTCTCTATTGAAGCAGAACAAAAGGAAATGAATGTGGAGAAGGGGATGAGTGGCAATATTGATGAAAAAGCTCAGGATGCTAATGCAATTGATTGTGCTGGTCCAAATGGAGAGGAGGTTTTCTATGAATTTTTAGTTAAATGGGTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAATCCCAGTTAAAAGTTCTTGCGAAGAGAAAACTAGAAAATTATAAGGCAAAGTATGGGATGGCAATAATTAATATTTGTGAGGAGCGCTGGAAGCAGCCTCAGCGAGTGCTAGCCCTTCAAACTTCCAAACATGGAACATCTGAAGCATTTGTAAAGTGGAGTGGACTGCCATATGATGAATGCACTTGGGAAAGTTTAGATGAACCAGTGCTTCAAATTTCTTCTCATTTGATTACAATTTTTAATAAGCTTGAAACTCTCACGTTGGAAAAGGATTCCTCAAAGGAAAATTCAACTAGGAGAAACAATGACCATCAAAATGATATTTTCAATCTTACAGAGCAACCTAAAGATTTGAAAGGTGGTTCTTTGTTTCCTCATCAGCTTGAGGCACTGAACTGGTTGCGCAAATGCTGGTATAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGACTTGGGAAAACAGTATCTGCTTGTGCTTTTATTTCATCCTTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCTTGGTACCACTTTCTACAATGCCTAATTGGCTTGCTGAATTTTCACTGTGGGCTCCAGATGTGAATGTTGTTGAATATCATGGCTGTGCTAAGGCTAGAGCCATAATTCGCCAGTATGAATGGCATGCTAATGATCCAAGTGGATTGAGTAAGAAAACTGAAGCCTATAAATTCAATGTGCTTTTAACTACGTATGAAATGGTTCTCGCTGATTATTCCCATTTACGTGGGGTTCCTTGGGAAGTTCTTGTTGTTGATGAGGGCCATCGACTGAAGAATTCTGGAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCTTTCCAACACCGGGTACTGTTGACAGGTACCCCTCTCCAGAACAACCTCGGCGAGATGTACAACTTACTCAACTTCTTGCAGCCAGCTTCATTTCCTTCTCTATCTTCTTTTGAGGAGAAATTTAATGATCTTACAACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGACTGAAAAAGGATGCCATGCAAAATATCCCTCCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAGATATTGCGGAATATTGGAAAAGGGGTTGCCCAACAGTCTATGCTGAACATTGTGATGCAATTGAGAAAGGTCTGTAATCATCCATACCTCATACCAGGAACTGAGCCTGAATCTGGTTCTGTCGAGTTCCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTGACTCTTCTACATTCTATGCTAAAGATTTTACACAGGGAAGGTCACAGAGTTCTTATTTTCTCTCAAATGACCAAACTTCTTGACATCCTGGAGGATTATTTGACTATAGAATTTGGGCCTAAAACATATGAGAGGGTGGATGGATCTGTTTCTGTAGCTGATCGCCAGACAGCAATTGCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCCACGCGCTCTTGTGGACTTGGAATAAATTTGGCAACGGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCCCATGCAGATATCCAAGCAATGAATCGAGCACACAGAATTGGACAATCTAATAGGCTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGACCAGCTTTTTGTAAACAAGTCTGGATCACAAAAAGAAGTAGAAGATATTTTAAAGTGGGGAACTGAGGAACTTTTCAACGATTCTCCAGGACTGAATGGGAAAGACATGAGTGAAAACAACAATAGTAGCAAAGATGAGCCTGTAGCAGATGTAGAACATAAGCATAGGAAGAGGACTGGTGGTCTGGGAGATGTGTACAAGGATAAGTGTACTGATAGCAACAGCAAGATTTTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGTTCAAATCTTCAAGATGGTTCAACTGATAATGCTGAAGGGGATTCTGAGAATGATATGCTGGGTTCAGTGAAGGCCCTTGAGTGGAATGATGAACAAACTGAAGAGCATGTAGTGGGTGAATCTCCTCCTGATGGGACTGATGACATGTGTCCACAAAATTCTGAGAAGAGAGAGGATAACACAATGAATGTCAATGAAGAAAATGAATGGGACAAACTACTGCGGCCCTATCTATCTTCTCTTATCATCAGACATCCATTGTCCACTGTTTCCGGCTGCCATCCACCACATGTTTTGTCCAGCAAAGTCAAGGTTAAGCCTGCCTTGAGTGGCAAGACCAATCCCCAGTGGTTGCTACGCCAAAAGCTTCATGACAGATTGCCATATGCTGATCTCTGTCAGCCCATCAGTAGGCTTGTGTGTCCTAATCACACTGGACCACCGCTGTTGGTCTTGTCAGCATCTCCTGGGCAGAACTTGTCTTCCTGTTTTATGGGTGTGGATACTTCTACTATTTCTTCTCATTCCTTTTGGGCCAATCCTATTACCATGGCCAAACTCAACATGAAGAACTACTTATCTTGGTCCACCTGCATTGAGTTATGTTTCCTTGGTCAAGGATACCATGACCATTTGGAAAAGGAACCGCCTGTCAACAAACTCGACCCCTGCCCGCCTACCACCGTTCGGTGCCCTTCTTCTCCCTTACCGCCTTCCACCGTTCGGCTCGACCTCTCCCCGCCTTCCACCGTTCGGTGGGAGAAATATCAAAATGAAGAGGAAGCAGCTCTTGGTCGAGGGAAGCGGCAGAGAAAAGCTGTTTCTTATAGGGAAGTATATGCTCCACATCCAAGTGAAACAATGAGTGAGAGTGGCGGTGAAGAGGAAAAAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCAGGACGGGCCCATAAGACAAAATATGTTAAACTCCGAGCTCGGCAAAAGGAAGTACTTGCCCGAAGGAAGGCGATTAAAGAAGCAAATCCTGAGGGTCTTCTAAGTAACGAGTTACTCTCACATTCTCCAGCCATTGCCAAAGCTGGGGATCTAGCGGCTGGACCAACACACTCAGTTCAAGAGTTGACTTCTATAAACATAGAGGACATCAAATACACACAACTTTCAGAAGCTCAGAATATCAACACGGACTCTTTATCAAGGATTGACAAGCTTTCCAAGCATAAAATGAGCAGTCACTTTGATGCTTCTGTCAGTAACCTAGGCCGTTCTCTCCCTGATATTTTTCTTCCAAGTCATCCTAAGGGGGGGCTGAGCATGACAAACAATATGTCCACCAACAATTTATTGCCCGTACTAGGGCTTTGTGCTCCCAATGCAAAACAAATAGAGTCATCAGAAACCAATACTTCAAAGTTAAATTGGAGACAAAATAGACATGGATCCAGACAAGAGTTTCCATTCAGTCTTGCATCAATGGATGCTGACGTGAGAAGTAAGGAAGTGGCAGCAAATACCAAGCTGGCAGATGCATCTACTGAAAAATTACACCCAAGTTTCAAAAATACCATCCCTGATAACAGTCTCCCATTTGTTCCATTTCCACCCTCTGTGCAAGGAAAGGAATCTGATGCATTTGAGAATTCAGGTGCTAGATTCTCTCATTTTCAGGAGAAGGTGGCATTGCCAAACCTGCCATTTGATGAAAGGTTGCTGGCCAGGTTTCCACTTACAACCAAGATTATACCAAATTCACATCTGGACCTTTTGCCTAATTTGTCTATAGGAGGAAGACTTGAATCTTTGAATGGATCTATGCAAGACCTTCCGACAATGCCAGCATTGCCTAATTTCAAAATACCCCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTACCCCCTACTTTGGGTTTGGGACAAAGGTCAACCACGTTCTCATCTTTCCCAGAGAACCATAGAAAGGTGCTTGAAAACATAATGATGAGAACCGGATCTGGATCAAGTAATTTATTGAAAAAGAAGTCAAAGTCCGATGGGTGGTCTGAAGATGAGCTTGATTCCCTATGGATTGGTGTTCGTAGGCACGGAAGAGGTAATTGGGATGCTATGATCCGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCCGAGGATTTATCCGTGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGGCCTCCTTTTCCTACGCAAAGATCCTCCAAGATGACAAAGTCTACCAAATCAACACATTTTCCAATCTCTGATGGCATGATGGAAAGGGCCTTGCATGGAAGCAAATTTCTCTTGCCACCAAAATTTCATAACCATCTGACTGACATGAAATTAGGGATAGGTGATTCTGCATCTAGTCTGTCACATTTTAGTGCATTGGACCGACCTAGTATGCAAAATGATCACTTTGTATCTCTTCCATCTTGGAGTTATGATAAAAGCAGATCTAAATTTCCTGAAGGTGCTTCTGCTGAAACATCTGATAGACCAGGTACTTCTTCCAGTGTACTGACTGAAAGACCGTTTCTGCTCAATTCTTTTGGAACCAGTACCTTGGGCTCTTTAGGTTTGAATTGCTCAGGCAGCATTGATGCACAGCAGAAGGAGGATGACCAAGGAAACACCAAGCGTGGAAAGTTGCCCATACTTCTAGATGGATCACCAAATGATATGCGTGATAATCATGTTAATGTAGGTAATGGCGAATCTAATAGCTCTGGGTTGTTATCTAACCCCATAAGATCTGATCTTTTGCACTCAAAAGTAGAGGAAGTGGGTGGAAGCAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTTAGCTCCCCGGTCAAACTTCCCAATCCTGAACTGCCACCCACAGTATCAGCCATTGCTCAATCAGTTCGTCTGTTATATGGGGAAGATAAGCCTACAATTCCTCCATTTGTGATTCCTGGACCACCTCCTTCCGTACCAAAGGACCCCAGGTGTAGTGTCAAAAAGAAAAAGAAGAGAAGATCACATAAGTTCAATCGGGGTCTTCCAGATTTTTCTGGAAACAGCAGGGACTTGCATAGCAGCCACCATGTTGATAATGGTGCCTCAAGTTCAATTCCTTCGGGCCCGCCATTGCCTCTACTTTCTCAGACAGGACCTCTAGGACCTCAGCAGATTGAATCTGACCTTAACTTGCCTTCTCTAAATTTGAAAGTGGCAAACTCGTCACACTCTTCAAAAAAAGCAATTTCAGGGATGTCTCCATCTCCTGAAGTGCTTCAGTTGGTTGCATCCTGTGTTGCTTCCGGCCCCCATCTTCCACCGATCACCACCGGTGCTTCAAACTTTCTTGACAGCAAGCATCCATTGCCAAGGCCTGTTGGGAGGGCCAAATTCAAAGACTCAGAAGGTGCCTTCAGAAATAAGAATCCTAGGCAGGCTTCACCAAAAATTTGGTGTCCACCTAAAGAGCAAGTACACGACCTTGACAGTGGAGATTCCAGCAAGACTCAGTCGGATCCCTCTCGGGTTGAACGGCCCGATGAAGTGGAGGTGTCATCTGAGGGAACTGTCTCAGACCATGCTGTGAGAGATCAGGAAACATAA 7308 0.4204 MIQYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKDQLKPINHLDPISKRARTKTVPTKSKGQINSLNLEKVSGLFGSKLISKKRSSSKGKSISTVGVKFFGKKLLSSSVDETGSDKPIDPSLGSPMEGTSSCLDADEKKSSLSPSDSPVDRKSTSPAKVVLSLSKITDLEAKDEQLEGKTSSPCNKIPLRKTLVLAIAANGEDVRKRKNKVVNDNTSQKKQKTEKGKKIVNASSTKSKSGNNKVHKKQKSSISASIPKEDVGNKNSQVQQKDEKFFRVMKDTSNELDKAQNLVDETLIHEDSTVVESLQVDRVLGCRIHGENTSSLHNLSLNVEGGSPSGDLVISENQTRLLEDNSTCANDLDVESTEVQVDDCQNVIKISDEEGMLINTNRMETIHVYRRSVTKESKKGNPIDSLSKATDDLGSCARDGIDQDDSAVSAEQLKKPNDKLEIEERINVALGSKDNSELPKSCETHDVSIEAEQKEMNVEKGMSGNIDEKAQDANAIDCAGPNGEEVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMAIINICEERWKQPQRVLALQTSKHGTSEAFVKWSGLPYDECTWESLDEPVLQISSHLITIFNKLETLTLEKDSSKENSTRRNNDHQNDIFNLTEQPKDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFSLWAPDVNVVEYHGCAKARAIIRQYEWHANDPSGLSKKTEAYKFNVLLTTYEMVLADYSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMSENNNSSKDEPVADVEHKHRKRTGGLGDVYKDKCTDSNSKILWDENAILKLLDRSNLQDGSTDNAEGDSENDMLGSVKALEWNDEQTEEHVVGESPPDGTDDMCPQNSEKREDNTMNVNEENEWDKLLRPYLSSLIIRHPLSTVSGCHPPHVLSSKVKVKPALSGKTNPQWLLRQKLHDRLPYADLCQPISRLVCPNHTGPPLLVLSASPGQNLSSCFMGVDTSTISSHSFWANPITMAKLNMKNYLSWSTCIELCFLGQGYHDHLEKEPPVNKLDPCPPTTVRCPSSPLPPSTVRLDLSPPSTVRWEKYQNEEEAALGRGKRQRKAVSYREVYAPHPSETMSESGGEEEKEPEPEPEREYTPAGRAHKTKYVKLRARQKEVLARRKAIKEANPEGLLSNELLSHSPAIAKAGDLAAGPTHSVQELTSINIEDIKYTQLSEAQNINTDSLSRIDKLSKHKMSSHFDASVSNLGRSLPDIFLPSHPKGGLSMTNNMSTNNLLPVLGLCAPNAKQIESSETNTSKLNWRQNRHGSRQEFPFSLASMDADVRSKEVAANTKLADASTEKLHPSFKNTIPDNSLPFVPFPPSVQGKESDAFENSGARFSHFQEKVALPNLPFDERLLARFPLTTKIIPNSHLDLLPNLSIGGRLESLNGSMQDLPTMPALPNFKIPPEDLFRYNQQDRDVPPTLGLGQRSTTFSSFPENHRKVLENIMMRTGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDAMIRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPPFPTQRSSKMTKSTKSTHFPISDGMMERALHGSKFLLPPKFHNHLTDMKLGIGDSASSLSHFSALDRPSMQNDHFVSLPSWSYDKSRSKFPEGASAETSDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGSIDAQQKEDDQGNTKRGKLPILLDGSPNDMRDNHVNVGNGESNSSGLLSNPIRSDLLHSKVEEVGGSSTSKDKLPHWLREAVSSPVKLPNPELPPTVSAIAQSVRLLYGEDKPTIPPFVIPGPPPSVPKDPRCSVKKKKKRRSHKFNRGLPDFSGNSRDLHSSHHVDNGASSSIPSGPPLPLLSQTGPLGPQQIESDLNLPSLNLKVANSSHSSKKAISGMSPSPEVLQLVASCVASGPHLPPITTGASNFLDSKHPLPRPVGRAKFKDSEGAFRNKNPRQASPKIWCPPKEQVHDLDSGDSSKTQSDPSRVERPDEVEVSSEGTVSDHAVRDQET 2435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 265 283 - -
Vimu11g01549 2435 Pfam Helicase conserved C-terminal domain 999 1110 IPR001650 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2345 2435 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2215 2229 - -
Vimu11g01549 2435 CDD SF2_C_SNF 994 1121 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2265 2295 - -
Vimu11g01549 2435 Coils Coil 651 671 - -
Vimu11g01549 2435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 906 1164 IPR027417 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2390 2435 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1965 1986 - -
Vimu11g01549 2435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 655 904 IPR027417 -
Vimu11g01549 2435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 68 IPR013083 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 127 176 - -
Vimu11g01549 2435 SUPERFAMILY Homeodomain-like 1910 1956 IPR009057 -
Vimu11g01549 2435 SMART helicmild6 1025 1110 IPR001650 -
Vimu11g01549 2435 SMART ultradead3 676 880 IPR014001 -
Vimu11g01549 2435 CDD CD1_tandem 506 571 - -
Vimu11g01549 2435 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 999 1158 IPR001650 -
Vimu11g01549 2435 ProSitePatterns Zinc finger PHD-type signature. 8 49 IPR019786 -
Vimu11g01549 2435 Gene3D - 914 1141 IPR027417 -
Vimu11g01549 2435 Gene3D - 589 639 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1180 1203 - -
Vimu11g01549 2435 ProSiteProfiles Chromo and chromo shadow domain profile. 505 573 IPR000953 -
Vimu11g01549 2435 Gene3D - 1882 1984 - -
Vimu11g01549 2435 SUPERFAMILY Chromo domain-like 500 575 IPR016197 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 225 250 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1168 1203 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2214 2295 - -
Vimu11g01549 2435 SMART PHD_3 7 50 IPR001965 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2358 2374 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 225 288 - -
Vimu11g01549 2435 SMART chromo_7 468 575 IPR000953 -
Vimu11g01549 2435 SMART chromo_7 585 642 IPR000953 -
Vimu11g01549 2435 SUPERFAMILY Chromo domain-like 579 625 IPR016197 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1492 1544 - -
Vimu11g01549 2435 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 1486 2384 - -
Vimu11g01549 2435 ProSiteProfiles Zinc finger PHD-type profile. 5 52 IPR019787 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2053 2074 - -
Vimu11g01549 2435 Gene3D - 671 913 IPR038718 -
Vimu11g01549 2435 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 692 869 IPR014001 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1265 1291 - -
Vimu11g01549 2435 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 914 1141 - -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1966 1986 - -
Vimu11g01549 2435 CDD SANT_TRF 1911 1955 - -
Vimu11g01549 2435 Pfam PHD-finger 8 49 IPR019787 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 1492 1507 - -
Vimu11g01549 2435 CDD PHD2_CHD_II 8 49 - -
Vimu11g01549 2435 ProSiteProfiles Chromo and chromo shadow domain profile. 587 649 IPR000953 -
Vimu11g01549 2435 Gene3D - 498 574 - -
Vimu11g01549 2435 Pfam Chromo (CHRromatin Organisation MOdifier) domain 588 638 IPR023780 -
Vimu11g01549 2435 ProSiteProfiles Myb-like domain profile. 1903 1959 IPR001005 -
Vimu11g01549 2435 MobiDBLite consensus disorder prediction 2102 2128 - -
Vimu11g01549 2435 CDD CD2_tandem 586 639 - -
Vimu11g01549 2435 SUPERFAMILY FYVE/PHD zinc finger 4 52 IPR011011 -
Vimu11g01549 2435 Pfam SNF2-related domain 698 973 IPR000330 GO:0005524|GO:0140658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01549 Vimu-Chr11 18620659 18634830 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Vimu11g01549 SNF2_N 1.3e-57 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01549 11 18620659 18634830 Vimu11g01549 11 18620659 18634830 ECH