Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03461 ATGATCCCTTCACTCTCTCTCCATATTATTCCTCTCCTCATTCTTCACATCCTCCTCCTAGCACCGCCGTCGCCGGCGGAAGCCCGCAATGGACAGTGGCAGCTCCTCCAAGAAAACATCGGCATTGTCGGCATGCACATGCAGCTCCTCCACAACGACCGAGTCATCATACTAGACCGCACTGACTTTGGATTCTCCAACATAACCCTCGCCGACGGTAGATGCCGCAAAAACCCAAATGAGATGGTCGTCAAAACCGACTGCACCGCACATTCCATCGAATACGACGTCGCAGCCAACAAAGTCCGCGCCCTCTTCGTCCAAACCAACGTCTGGTGCTCCTCCGGTTCGGTTTCCCCCGACGGAACACTAGTCCAAACCGGTGGCTTCAACGACGGAGATCGTACAGTCAGAACCTTCACCCCGTGCCGCACCTGCGACTGGCGCGAAGTTAACAATGGACTATCAGCTCGAAGATGGTACGCCACCAACCACATCTTGCCAGATGGACGACAAATAATAATCGGCGGTAGAAGACAATTCAACTACGAGTTTTACCCCAAGACAGAAACCACGGCAATGAACACTTACAGTTTACCTTTTCTCGTTCAAACAAACGACGCCTCGGCGGAAAATAATCTCTACCCCTTTGTTTTCTTAAACGTCGATGGCAATCTTTTCATCTTCGCAAACAACCGCGCTATCTTATTCGATTACAATAAGAACCGTGTCGTCAGAACCTACCCTCAAATACCCGGTGGAGACCCACGGTGCTATCCCAGTACCGGTTCCGCGGTTTTGCTTCCGTTGAAGAATCTTCGAGAATCCAATCTGGAAGCCGAGGTTTTGATTTGCGGTGGAGCCCCGAGAGGGGCTTATCCGGATACCCTATCGGGTCGGTTTACCGGAGCGTTGAAAACGTGTGCTAGGATTAAAATAACCGACCCGAAGCCGAGTTGGGTGATGGAAACCATGCCAGGTGCGAGAGTCATGAATGACATGGTTTTACTCCCAAACGGCGACGTTTTAATTATTAATGGAGCTTCAGAAGGGACGGCGGGCTGGGAATTGGGTCGGGACCCGGTATTGAGTCCATTTCTATATAAACCCAATAATCGGATCGGGTTGAGATTTGAGGTCCAAAACCCGTCAGATATTCCGCGAATGTACCACGCCAGTGCCATTGTGCTTCGTGATGGTCGCGTTCTTGTGTCTGGGAGCAATCCTCACGCATGTTACAATTTCACCAACGTAATGTTCCCAACGGAATTACGGTTGGAAGCGTTTTCTCCTTCTTATCTTGAGCCCAGATTCTCTATCCTGCGTCCCACAATAGTGTCCCCTTCGTCCCAAACAATAGTGAAGTACGGTGAGACATTGAAGGTTGGATTTGAGGTGACCGCGAGTTTATCTAAGGATTCGGTGTCGGTTACGATGTTGGCGCCGCCTTTTGCAACGCACTCCTTCTCCATGAATCAGAGGTTGTTGGTTTTGGAGGCGCAAGATTTGAGCAAGGTCGGGAAATCGACTTACGAGGTGGAAGTTACGGCCCCGGGTTCCGGTGTTCTTGCACCGCCGGGTTTCTATCTGCTATTTGTGGTACATCAAGAAATTCCAAGCCACGGTATATGGGTTCGGATGGTGTGA 1647 0.5064 MIPSLSLHIIPLLILHILLLAPPSPAEARNGQWQLLQENIGIVGMHMQLLHNDRVIILDRTDFGFSNITLADGRCRKNPNEMVVKTDCTAHSIEYDVAANKVRALFVQTNVWCSSGSVSPDGTLVQTGGFNDGDRTVRTFTPCRTCDWREVNNGLSARRWYATNHILPDGRQIIIGGRRQFNYEFYPKTETTAMNTYSLPFLVQTNDASAENNLYPFVFLNVDGNLFIFANNRAILFDYNKNRVVRTYPQIPGGDPRCYPSTGSAVLLPLKNLRESNLEAEVLICGGAPRGAYPDTLSGRFTGALKTCARIKITDPKPSWVMETMPGARVMNDMVLLPNGDVLIINGASEGTAGWELGRDPVLSPFLYKPNNRIGLRFEVQNPSDIPRMYHASAIVLRDGRVLVSGSNPHACYNFTNVMFPTELRLEAFSPSYLEPRFSILRPTIVSPSSQTIVKYGETLKVGFEVTASLSKDSVSVTMLAPPFATHSFSMNQRLLVLEAQDLSKVGKSTYEVEVTAPGSGVLAPPGFYLLFVVHQEIPSHGIWVRMV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03461 548 FunFam Aldehyde oxidase GLOX 27 439 - -
Vimu10g03461 548 Pfam Glyoxal oxidase N-terminus 45 287 IPR009880 -
Vimu10g03461 548 SUPERFAMILY Galactose oxidase, central domain 92 435 IPR011043 -
Vimu10g03461 548 CDD E_set_GO_C 442 547 IPR015202 -
Vimu10g03461 548 Pfam Galactose oxidase-like, Early set domain 442 546 IPR015202 -
Vimu10g03461 548 Gene3D Immunoglobulins 441 548 IPR013783 -
Vimu10g03461 548 PANTHER SECRETED PROTEIN-RELATED 23 547 - -
Vimu10g03461 548 Gene3D - 27 437 IPR037293 -
Vimu10g03461 548 SUPERFAMILY E set domains 441 547 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03461 Vimu-Chr10 44398101 44399747 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g03184 1 44015977 44017422 Vimu10g03461 10 44398101 44399747 PCT