Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03437 ATGGCCGCCGAAGAGGGACAAGTTATCAGTGTCCACACCGTGAGTGACTGGAAGGAACGTCTCGAGAAGGGAAAAGAGGCCAACAAGCTGATTGTGGTGGACTTCACCGCTTCTTGGTGCGGTCCATGCCGATTCATTGCTCCAATCCTAGCTGAGATTGCTAAAAAGCTGCCCCGTGTCACCTTTCTCAAGGTTGACGTAGATGAACTGGAGTCTGTTTCAAAAGAGTGGGAGATTGAAGCTATGCCAACCTTCCTGTTCTTGAAAGAAGGCAAGCTGGTGGACAAGGTTGTGGGAGCCAAGAAAGATGAGCTGCAACAGAAAATAACCATGCATGCAGATGCTGCTGCTGCTGGTAGTTCCATATGA 369 0.4959 MAAEEGQVISVHTVSDWKERLEKGKEANKLIVVDFTASWCGPCRFIAPILAEIAKKLPRVTFLKVDVDELESVSKEWEIEAMPTFLFLKEGKLVDKVVGAKKDELQQKITMHADAAAAGSSI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03437 122 Gene3D Glutaredoxin 1 118 - -
Vimu10g03437 122 PANTHER THIOREDOXIN 8 110 - -
Vimu10g03437 122 CDD TRX_family 19 109 - -
Vimu10g03437 122 FunFam Thioredoxin 7 114 - -
Vimu10g03437 122 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Vimu10g03437 122 Pfam Thioredoxin 10 110 IPR013766 -
Vimu10g03437 122 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Vimu10g03437 122 PRINTS Thioredoxin family signature 78 89 - -
Vimu10g03437 122 PRINTS Thioredoxin family signature 31 39 - -
Vimu10g03437 122 PRINTS Thioredoxin family signature 39 48 - -
Vimu10g03437 122 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03437 Vimu-Chr10 44185282 44186562 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03437 10 44185282 44186562 Vimu10g03437 10 44185282 44186562 ECH
Vimu1g03162 1 43840523 43841394 Vimu10g03437 10 44185282 44186562 PCT