Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03335 ATGCGGGAAAGCTCGCGAGGGAGAGCGAATGGTTCAGTTAAGGGTGGAAAAACATCGAGCAAAGATAGAAAACTGGCTTTACAGAAAGATGTTGACAGGTTGAAGAAAAAGCTTAGGCGTGAAGAGAACATACACAGAGCATTGGAGAGAGCTTTCAACAGGCCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCTCCCTACACACTAGGACTTCTGGCTGAGGTGGCAGTACTGGAAGAAGAAATTGTTAGGCTTGAAGAACAGGTTGTGCATTTCAGGCAGGACTTGTACCAGGAAGCTGTGTACATGTCGTCCTCTAAGATGAAACTGGAGCAATCAGCCGGTGGGAGCAATTTAAGTCCGCAGAGTAGTCCCAAACCGGTTAAAGAGGAGTCCCTTTCCCAGACGCTGGATAATGCTGCAAGATCTGAAACTATGTCTATAACACTTCCAAAGGATAGACATGGAAAAGAGAACCAAACATGTACTAATTCTTCCAAGAGTAGCAAACAGTCCATATGCAAAGGCCAGACTACCAAATCGCCGATTAAGAAACTCCCCATCGACAATAAATCACCACAGAAACGTTGGGATCCTCCAAAAAAGCAGCAAGAACTAAGGGTGAAAGACCTGCCAATTGCAGAAGTGAGAAACCATAGTCTACACGACAAACCAAAAGGGGGAGAAAGTCCAAATATAATATCCGAAATTATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTACTGCGAAGAATTTGGATTCTGCAGGTAATGTACCACACTCATGGATTCCAAAATCTAGTAAAAACTGCGTTGAAGGAAGTGAGTTTTGGGATCCTTATGGTATCTGTTTCGAATTCGGAAAGAGGGATATTGGTCCATACAAGCAATTATGTGCAATTGAAGCCAAATCATTCGATCCAAAACGAACTGCAAAATCTTTGTTTTTACTGCACCGGTTGAAACTTCTTCTGAGAAAACTAGCCTGTGTCAACTTTGATAATCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAACATCTATAACTCATGTATGATGAATGCGTACATAGAAAATGGCATACCAGAGAGTCCTGAAATGGTTGTTGCGCTGATGCAGAAGGCCACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACTATAGAACATGGCATTTTAAGACTTCCTTATAACTTCAAATTTCTAAATTCTAAACAGACAACATTATCAAAGGGAGGGAAAAATCATGAAACTTATGGACTAGAATTGTCAGAACCCCTGGTGACATTTGCTCTATCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGAATTTACACAGCATCTCAGGTTGAGAACGAACTTGAGATGGCCAAAAAGGAATACTTACAGGCTGCAGTTGGAATTTCGAAATCAAAGTTCCTTATCCCGAAGTTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATTTGCCTCCAATTACCAAGTGATGTGGGGAAAGAAGCTATTAAGTTCCTTGAGGAAAGAAAAACCGAGCCCCTCTCACAATTTGTACAGATTATGCCACACGAGTTCAATTTTAGATACTTGTTGTGTACATAG 1641 0.4205 MRESSRGRANGSVKGGKTSSKDRKLALQKDVDRLKKKLRREENIHRALERAFNRPLGALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEQSAGGSNLSPQSSPKPVKEESLSQTLDNAARSETMSITLPKDRHGKENQTCTNSSKSSKQSICKGQTTKSPIKKLPIDNKSPQKRWDPPKKQQELRVKDLPIAEVRNHSLHDKPKGGESPNIISEIILKCLSSILLRMSTAKNLDSAGNVPHSWIPKSSKNCVEGSEFWDPYGICFEFGKRDIGPYKQLCAIEAKSFDPKRTAKSLFLLHRLKLLLRKLACVNFDNLNHQEKLAFWINIYNSCMMNAYIENGIPESPEMVVALMQKATINVGGHLLSATTIEHGILRLPYNFKFLNSKQTTLSKGGKNHETYGLELSEPLVTFALSCGTWSSPAVRIYTASQVENELEMAKKEYLQAAVGISKSKFLIPKLLDWYLLDFAKDLESLLDWICLQLPSDVGKEAIKFLEERKTEPLSQFVQIMPHEFNFRYLLCT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03335 546 Coils Coil 24 51 - -
Vimu10g03335 546 PANTHER EXPRESSED PROTEIN 13 545 - -
Vimu10g03335 546 MobiDBLite consensus disorder prediction 114 230 - -
Vimu10g03335 546 Pfam Protein of unknown function, DUF547 338 468 IPR006869 -
Vimu10g03335 546 Coils Coil 70 97 - -
Vimu10g03335 546 MobiDBLite consensus disorder prediction 163 187 - -
Vimu10g03335 546 MobiDBLite consensus disorder prediction 1 28 - -
Vimu10g03335 546 MobiDBLite consensus disorder prediction 191 228 - -
Vimu10g03335 546 MobiDBLite consensus disorder prediction 114 148 - -
Vimu10g03335 546 Pfam Leucine-zipper of ternary complex factor MIP1 20 101 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03335 Vimu-Chr10 43493032 43496048 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03335 10 43493032 43496048 Vimu10g03335 10 43493032 43496048 ECH
Vimu1g03034 1 42770418 42774584 Vimu10g03335 10 43493032 43496048 PCT