Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03269 ATGCGTTCCTTGCCAATGTTGCTACTGTTGCTATTCCTGATTCAACCCCGCCCAGTGAAGCCACAAGGCTACGATAGGAATATATTCATATTAGCGGGTCAAAGCAACATGGCGGGTCGGGGCGGCGTAGTCAACGACACGGCCACCGGGGTAACAACATGGGACGGGGTCGTTCCACCCCAGTGCCGTTCCAACCCCTCCATTTTGAAGCTCGACGCGCACCTGGCGTGGGTGGAGGCGCGTGAGCCGCTCCACGCGGACATCGATTATAAGAAGACCAACGGAGTGGGTCCGGGAATGGCATTCGCGAACTCGGTGTTGGAAAAACACCCAAAATTTGGTGTAATCGGTTTGGTCCCTTGCGCGATCGGAGGCACCACCATAAGCGAGTGGGAACGTGGAAGAGAGCTTTACAGTGAGACGATAAAGCGTGCGAAGGCATCGGTGCGTGACGGTGGCACCATTCGTGGCTTGCTTTGGTACCAAGGGGAAACCGATACGGTGAACCTACACGATGCACAGTTGTACCAACGACGACTCCACAAGTTCTTCTTGGATGTTCGTGATGATCTGCAGTCTCCATTGCTTCCTATTATCCAGGTAGCATTGGCATCTGGATCAGGCCCTTACATAGAGATAGTGAGACAAGCCCAACTGGGCACTGACCTCCTCAACCTGAGGACTGTGGACGCACATGGTTTGCCTCTTCAGCCCGATGGGCTACACCTCTCCACTCCGGCCCAGGCTCATCTTGGACAAATGATGGCTGATGCATTCCTTCAGTTCGTACCCACTTCAAACATAAATTACAATCTCAGCCCAATTCGTAACGAGGCCATAAGGCTTTACAACTGTGCCTTTTGTGTTTACAAGCTTACCTTGTTCATAACACTTCCCTCGATTTTGCACAAATCTTTCCTATAG 924 0.5216 MRSLPMLLLLLFLIQPRPVKPQGYDRNIFILAGQSNMAGRGGVVNDTATGVTTWDGVVPPQCRSNPSILKLDAHLAWVEAREPLHADIDYKKTNGVGPGMAFANSVLEKHPKFGVIGLVPCAIGGTTISEWERGRELYSETIKRAKASVRDGGTIRGLLWYQGETDTVNLHDAQLYQRRLHKFFLDVRDDLQSPLLPIIQVALASGSGPYIEIVRQAQLGTDLLNLRTVDAHGLPLQPDGLHLSTPAQAHLGQMMADAFLQFVPTSNINYNLSPIRNEAIRLYNCAFCVYKLTLFITLPSILHKSFL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03269 307 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 26 261 IPR005181 -
Vimu10g03269 307 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 19 266 - -
Vimu10g03269 307 SUPERFAMILY SGNH hydrolase 27 276 - -
Vimu10g03269 307 Gene3D SGNH hydrolase 26 263 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03269 Vimu-Chr10 42952223 42954592 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03269 10 42952223 42954592 Vimu10g03269 10 42952223 42954592 ECH
Vimu1g02954 1 41904758 41905662 Vimu10g03269 10 42952223 42954592 PCT