Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03235 ATGCTAGAAGCTGCAATCTCCACGCCCAAGAAACTCGCGCCTCGTTACACCTCATCGTCCTCCTCCTCGTCTCCTCGGTCGCCGTCGCCATTCACGCCCAAACGATCACACTCGGTGGAGCGAAGACGACCAGGCACTGGTGGCACCACCCGCACGACGTCGTCGTCGTCTGCCAAAATGCTTCCAACTTCCGCGATAACAAGAAGCCTATCCGTGTCGTTTCAGGGGGAGTCGTTCTGGATCACCGTCAACAAAGCCAAACCGACAACAAACGTCGTTTCCTCTCCCAAACTCGTCGCGCCGAGAAAATCGCCGTTGGACGGCGCGTCGTCTCCGCGAGGAGTTATAAATAGCAGGGGCCAGGTTTCTTTTATTCGTCCTGCTTCACCGAACAAGGTTTCTAATGCAGTGCCAGCCTCTTCTTCTTCTTCCAGAGGTGTGAGCCCCCTTAGGCTCGGAAACGGAGGGTCCTATAACGAGCCTTCTGTTTTGAGTTTTGCCGTTGATGTTAAGAGAGGGAGGGTGGGAGAGAACCGAATTGTGGAGGCGCATTCGCTGAGGCTTCTCCATAACCGCCTCTTGCAGTGGCGTTTTGTCAACGCCAGAGCATATTCTGATCTCTCTGCACGGAAATCCAATGCCGAGAATTGTCTCTGTGATGCTTGGGCATCTACCACTAAACTACGAGAATCTGTGAGCTCCAAAAGGAGAGAGCTACAATTGCTGAAGCATAAATTGAAGCTGGTTTTCATTCTCAAAAAACAAATGGTTTATTTGGAAGATTGGGCTATTTTAGATGAAGTTTACATAAGTTCACTTGCCGGAGCTATTGAAGCATTAAAGGCCAGCACTCTCCGGCTCCCTGTTGTTGATGGGGCCAAGGCAGATGTACATAAAGTGAAGGATGCTGTTTGTTCAGCTGTGGATATAATGAAGGCCATGGGATCCTCCGTTGGATATTTAAATTCGTTGGTGGTCGAAGTTGCCAACTTGATTACAAAGGAGCATGTTTTGCTTGATGAGTGCAGACACCTTTTAGCAATGGTAACAACCATGCAGGTTAGAGAGTGTAGCCTTAGAACGCATATTTCACAACTGAAGTGCTTACCTGAAGCTCAACATCGAAAATAA 1131 0.4916 MLEAAISTPKKLAPRYTSSSSSSSPRSPSPFTPKRSHSVERRRPGTGGTTRTTSSSSAKMLPTSAITRSLSVSFQGESFWITVNKAKPTTNVVSSPKLVAPRKSPLDGASSPRGVINSRGQVSFIRPASPNKVSNAVPASSSSSRGVSPLRLGNGGSYNEPSVLSFAVDVKRGRVGENRIVEAHSLRLLHNRLLQWRFVNARAYSDLSARKSNAENCLCDAWASTTKLRESVSSKRRELQLLKHKLKLVFILKKQMVYLEDWAILDEVYISSLAGAIEALKASTLRLPVVDGAKADVHKVKDAVCSAVDIMKAMGSSVGYLNSLVVEVANLITKEHVLLDECRHLLAMVTTMQVRECSLRTHISQLKCLPEAQHRK 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03235 376 MobiDBLite consensus disorder prediction 12 34 - -
Vimu10g03235 376 MobiDBLite consensus disorder prediction 114 150 - -
Vimu10g03235 376 MobiDBLite consensus disorder prediction 94 153 - -
Vimu10g03235 376 Pfam QWRF family 53 340 IPR007573 -
Vimu10g03235 376 MobiDBLite consensus disorder prediction 1 62 - -
Vimu10g03235 376 PANTHER AUGMIN FAMILY MEMBER 111 367 - -
Vimu10g03235 376 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03235 Vimu-Chr10 42758158 42761649 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03235 10 42758158 42761649 Vimu10g03235 10 42758158 42761649 ECH
Vimu1g02938 1 41710588 41715362 Vimu10g03235 10 42758158 42761649 PCT