Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03224 ATGGGAAAGCGCAATTCTCAACGTAAAAGTGCTGCGATGTTTGATAGTGATGATGATAGTAGCGTGACCTCGTCGTCAACTGCTCGTTCTGATCTCATGTCGGTGTCCGGAGCGGAAGATGTGCAGTTTGTTCAAGATTCCTTGCTGGACCAAGCTCTCGATGCACTAGATGAGAAAAGATTTGCTACGTTGTTACATCAATGCCTTTCTTCAATTAAAAAGGGATCTAAAAAGACATCTGCTAAAGAGATAGCTTTGGCATCTCATGCGATTGGTTGTCTGGCCTTGACTGTTGGATGTGGTGATAATGCCCGTGAAATATTTGAAGAATCCATTCGTCCTTTGGATGAATCTCTCACATCTACAATAGATGTTTCGAAGATACCATCATTGTTGGAGTGTTTGGCTATAATTACCTTTATTGGGGGGAATGATCAAGAAGAAACAGAACGATCAATGGACATAATGTGGCGAGTTATTAATCCCAAATCAGGTTCCAATGTAGTTGCTGTCAAACCTTCTGCTTCATTAATAGCTAATGTGGTGTCTGCGTGGTCTTTTCTTCTCTCCACAATAAGCAATTTGAAGTTAAATTCAAAAAATTGGCAAAATTCAATATCTTATTTATCTGGTCTTCTAGACAAGGAAGACAGATCTGTACGAATTGCTGCTGGTGAAGCACTTGCTCTGATTTTTGAAATTGGAGTTATAGATAAATTTTCTGCCCAGTCAGACAATGCAAGTGATGCAACGCAAGAAGGGAGTAAACCACTCGAAAGCTACATATTTTTACAGGGACTAAAAGGAAAGGTGTTGAATCAATGCAAAAAACTTTCCATAGAGGCGGGTGGAAAAGGTTCTGCAAAGAAAGATCTTAATAGTCAAAGGAACTTGTTCCGAGATATCTTGGACTTTTTTGAGTATGGTTACTCCCCGGATATTTCAATGAAGATTGGGGGTGATTCCCTGCAGACATCATCGTGGTCTGAAATGATACAGTTGAATTTTATCAAGCATTTTCTTGGAGGAGGATTCGTTAAGCATATGCAGGAAAACGAGTTCCTACATGATGTATTTGGTTTTTCGCCGAAGAGAAAATATCTTAATAACAGCGAACACAAAATGTCTGGTGGTGAAAAGAGAATGTTTAAATCTCCAAATTCGGTTTTGAACAAGGCTAGGACGCAATTACTTAATAAGCAGCGGATATTATCCGAGGGCAGAAACTTCGGCCACTACGCCATCAACCACGAGGATGCATGA 1263 0.3998 MGKRNSQRKSAAMFDSDDDSSVTSSSTARSDLMSVSGAEDVQFVQDSLLDQALDALDEKRFATLLHQCLSSIKKGSKKTSAKEIALASHAIGCLALTVGCGDNAREIFEESIRPLDESLTSTIDVSKIPSLLECLAIITFIGGNDQEETERSMDIMWRVINPKSGSNVVAVKPSASLIANVVSAWSFLLSTISNLKLNSKNWQNSISYLSGLLDKEDRSVRIAAGEALALIFEIGVIDKFSAQSDNASDATQEGSKPLESYIFLQGLKGKVLNQCKKLSIEAGGKGSAKKDLNSQRNLFRDILDFFEYGYSPDISMKIGGDSLQTSSWSEMIQLNFIKHFLGGGFVKHMQENEFLHDVFGFSPKRKYLNNSEHKMSGGEKRMFKSPNSVLNKARTQLLNKQRILSEGRNFGHYAINHEDA 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03224 420 MobiDBLite consensus disorder prediction 1 29 - -
Vimu10g03224 420 SUPERFAMILY ARM repeat 47 235 IPR016024 -
Vimu10g03224 420 Pfam Interferon-related developmental regulator (IFRD) 54 307 IPR007701 -
Vimu10g03224 420 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 58 415 IPR039777 -
Vimu10g03224 420 Pfam Interferon-related protein conserved region 352 402 IPR006921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03224 Vimu-Chr10 42662451 42666794 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g02915 1 41507337 41514224 Vimu10g03224 10 42662451 42666794 PCT