Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03219 ATGCAACTTCAAAGTCTGTATGTAAGTGAAGTGTCACCAACTCTAGATTTAGATAAAGTTAATCTGTCAGAATCTACAAGAAGGGCATTTGGTCTAGTGAGGTCCCGAGTTCGATTCTCGGAATGCCCCGAAGTAGTTTTGGCAAATAAAGTCAGTTTCCGGGTTGCTTGTATATTGTTTGATGAAATGCATGGCTGTTTGGTTAAATTATTTGCTGTCAAGATCGCGAACGGGAAGGTGACGGATTGCAGGATCGGTATTTTGCTCGTGAAAGCATTTGTGCGGGCTCGAGTTTTGTCCAGTTCGGATGCCAGCACATGTAGTTGGGCTTTCCGGGGTTCTCCATCGCAGATCAGAACCAAACAGCATCCTGCTCTGCTCGACTGTGTCCCTGGCCATCACAGCTTGTCTGCCATCACAGCACTCGCGTTGCTATTGCCGACGCTTGCATCACCGTCGATAGGGTTCGCGTCACTATCTCTTGCTCTTGCATCACCATCACCGGCGTTGCCTTCATCACCAGCGGCTTTTCCTTCATCGTCGCCGGTCTTCGCCGACAGTGACACCAACTGTTGGGGTGCGTCGATCTTTGTTTTGGCTGGAGATAGCATTTGGTCACAAGGAAGGAAAATGGTGTTTGGGCAAGTAGTAGTTGGGCCTCCTGGCTCTGGCAAAACAACTTATTGCAATGGCATGTCTCAGTTTCTAAGTCTCATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCCGCTAACGATTCATTACCCTATGAATGTGCTGTGAACATTGAGGATCTTGTGAAATTAAGTGATGTAATGGTGGAACATTCACTTGGTCCAAATGGGGTGGAACTCTTTTGTCTTCATTCAAATGCCAAGAATGTTATCATGAAGCTCATAAAGAAATTGAACCTAAGGTTAACTGCAATGCATTTGATTGATGCCCATCTTTGCAGTGACCCTGGGAAATATATTAGTGCATTGCTTTTATCCTTGTCCACGATGCTACATCTAGAACTCCCTCACATAAATGTCTTGTCTAAAATTGATTTAATTGAGAGCTACGGAAAACTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTACAACACCATCTTGATCAAGATCCTCGCTCTGCTAAGTACAGGTGTGGTGTGGCCTTGACTGCTAACCAAAAACTCACAAAGGAACTATGTGAAGTTATTGAGAACTTCAGTCTTGTGAGTTTTACAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTGGTGAAGCTGATAGACAAATGCAATGGGTACATATTTACCGGTATAGAAGCAAGTGCAGTTGAATTTAGCAAGCTTGCAGTTGGTCCTCACCAAGAAGAAGATGTTGCACCATGTTCAAGCCCCAAGACGTCCAAGAGAAAAAAAGAAAGTAGAAATAACAACCCATACTCCGATCGAGGCTTAGACAAATTTTCAGCCCTTTTGGCTGATCTTGACGAGAGAAGGCAACAGGAGATATCTTTGGTCCGGTTTGCCTATTCAAGCAACGATGATTTCGTTCCCATAGTGGTCAAAGTGAAAAACAAGAGTCAGAACAAGAAACACAAGAGTGAAGAACTCAAAACAACACACTTGACATCTTTCTCGGAGCAATTGGAGAAATCAGCTGAAGAAGCAACCGTGGAAGAAAGGAAGGAACAAAAGTTGGAATCTCATAAGAAGAAAGATTTTAGCTTTTCATGGAACATGTTGAAGTGGCCTTCTTTCTATGTGCCAGCGGTTGTTATTTTGATTTTGGTTTTTCTGATTGTGTTTGGGAGATCTGTTGCAACACTCTGCACTTGTGTTGTGTGGTATGTGGTTCCCATGTTGAGTGAATGTTATTATGATAGTTCAAAGCCAAGGAAATCGGTGATGAACTGGAATAAGAGAGATTATGTTTGGGGATGGTTGAATGACACGAAGATGGTGAATCCTGAAGAGTTAGCTTCTCCAAGAAGTGGTGATTTCAAGGCTTATTCCAATGGCAAGAATTCGGGGAAACATGGCCACCAGAAAAGCTGGTGA 2073 0.4308 MQLQSLYVSEVSPTLDLDKVNLSESTRRAFGLVRSRVRFSECPEVVLANKVSFRVACILFDEMHGCLVKLFAVKIANGKVTDCRIGILLVKAFVRARVLSSSDASTCSWAFRGSPSQIRTKQHPALLDCVPGHHSLSAITALALLLPTLASPSIGFASLSLALASPSPALPSSPAAFPSSSPVFADSDTNCWGASIFVLAGDSIWSQGRKMVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMVEHSLGPNGVELFCLHSNAKNVIMKLIKKLNLRLTAMHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIESYGKLAFNLDFYTDVQDLSYLQHHLDQDPRSAKYRCGVALTANQKLTKELCEVIENFSLVSFTTLDIQDKESVGNLVKLIDKCNGYIFTGIEASAVEFSKLAVGPHQEEDVAPCSSPKTSKRKKESRNNNPYSDRGLDKFSALLADLDERRQQEISLVRFAYSSNDDFVPIVVKVKNKSQNKKHKSEELKTTHLTSFSEQLEKSAEEATVEERKEQKLESHKKKDFSFSWNMLKWPSFYVPAVVILILVFLIVFGRSVATLCTCVVWYVVPMLSECYYDSSKPRKSVMNWNKRDYVWGWLNDTKMVNPEELASPRSGDFKAYSNGKNSGKHGHQKSW 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03219 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 439 IPR027417 -
Vimu10g03219 690 MobiDBLite consensus disorder prediction 468 485 - -
Vimu10g03219 690 Pfam Conserved hypothetical ATP binding protein 283 438 IPR004130 -
Vimu10g03219 690 PANTHER XPA-BINDING PROTEIN 1-RELATED 283 457 IPR004130 -
Vimu10g03219 690 MobiDBLite consensus disorder prediction 670 690 - -
Vimu10g03219 690 Gene3D - 282 448 IPR027417 -
Vimu10g03219 690 CDD GPN2 213 435 IPR030231 -
Vimu10g03219 690 MobiDBLite consensus disorder prediction 461 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03219 Vimu-Chr10 42629276 42637233 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03219 10 42629276 42637233 Vimu10g03219 10 42629276 42637233 ECH
Vimu1g02911 1 41488126 41489700 Vimu10g03219 10 42629276 42637233 PCT