Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01073 ATGTCCATGGATGAATATTGTGGTGACGTATCTGATTCTGTTGAGTTGCAAAAAGATAAACTACTTGGTGGCCTTTTAGCAGATGGTTTCGATGAAAGATCTTGCTTCAGCAGGTACCATTCTGCCTCGTATGGGAAAGGACTATCAGGAAATCCTTCACCTTACCTTATTTCTAGATTGAGAAAATATGAAGCTCTTCACAAGGAATGTGGACCTTACACTGAATCCTATAATAAAACGGTGAAAGATCTCAGGTCTGGTCATGTAAGTGATTCCCCTGCGTGTAAATATGTGGTATGGATTTCATATAGTGGGCTAGGGAATAGGATATTGACCTTAGCTTCTGCATTTCTATACGCCCTCCTCACGAATCGTGTTTTATTAGTTGATCCTGGAGCTGATATGGTAGATCTTTTTTGTGAACCGTTTCCACATGGTTCCTGGTTTCTCCCTCCTGATTTCCCTCTCAACAGTCATTTTTCCAAATTTGATCAGAAATCTGATCAATGTTACGGGAAAATGCTGAAAAATGAAGCAACTACAAAATCCACTGTGCCCTCTTTTGTCTATCTTCATTTAGCACATGACTATGATGATCAAGACAAACTTTTCTTCTGTGATGAAGACCAAACTTTTCTTCAGAAAGTACCATGGTTAGCGGTGAGAACAGATAATTACTTTGTCCCATCTCTATTCTTGATGCCATCGTTTGAGCAGCAACTGAGTGATCTCTTTCCGAACAAGGAAACAATTTTTCATTTCTTGGGTAGATATCTTTTCCACCCCACCAACAAAGTATGGGGACTTGTTAGTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAAATTAGGCATCCAGATAAGAGTGTTTGAAACTGGAACTGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGCACCTTGAAGGAGAATCTTTTACCTGATGTTATTAGAAAGGGTGATTTGGTTAACTCATCAGGAAAGCCGAAGTCAAAAGCTGTACTGATGACATCGTTGAGCTCTGGTTATGTTGAGAAAGTGAGAGACATGTATTGGGAACATCCTACAGCGACAGGAGAAATTATTGGCATTTACCAGCCAAGCCATGAAGGTTATCAACAAACAGAGAAGAAGATGCACAACCAAAAAGCTTGGGCAGAAATGTACTTATTGAGCTTGACCGACGCGTTGGTCACGAGCTCGTGGTCTACTTTCGGCTATGTGGCACAGGGGCTTGGAGGTTTGAAACCATGGATACTGTACAAGCCAGAGAATGGAACAGCCCCTGATCCTGCTTGTCAACGTGCCATGTCAATGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACCGGTGCACTTGTTCCACATGTACGGCACTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAGCTTTAGTTCGCAATAA 1467 0.4165 MSMDEYCGDVSDSVELQKDKLLGGLLADGFDERSCFSRYHSASYGKGLSGNPSPYLISRLRKYEALHKECGPYTESYNKTVKDLRSGHVSDSPACKYVVWISYSGLGNRILTLASAFLYALLTNRVLLVDPGADMVDLFCEPFPHGSWFLPPDFPLNSHFSKFDQKSDQCYGKMLKNEATTKSTVPSFVYLHLAHDYDDQDKLFFCDEDQTFLQKVPWLAVRTDNYFVPSLFLMPSFEQQLSDLFPNKETIFHFLGRYLFHPTNKVWGLVSRYYQAYLANADEKLGIQIRVFETGTGPFQHVLDQILACTLKENLLPDVIRKGDLVNSSGKPKSKAVLMTSLSSGYVEKVRDMYWEHPTATGEIIGIYQPSHEGYQQTEKKMHNQKAWAEMYLLSLTDALVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPACQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDSFSSQ 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01073 488 Gene3D - 93 141 - -
Vimu10g01073 488 FunFam Galactoside 2-alpha-L-fucosyltransferase 93 144 - -
Vimu10g01073 488 PANTHER FUCOSYLTRANSFERASE 2-RELATED 15 483 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vimu10g01073 488 Pfam Xyloglucan fucosyltransferase 16 455 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01073 Vimu-Chr10 10146839 10148340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g01073 7 482 Xyloglucan Fucosyltransferase1 AT2G03220 67.017 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01073 K13681 - gmx:100800258 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01073 10 10146839 10148340 Vimu10g01073 10 10146839 10148340 ECH