Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00821 ATGAGTGGTAATGGAAGGAAGAGGCGCCATTTCAGCAGAATCCATGCATTCTCTTGTGGGAAAGCTTCGTTCAAAGGGGAGCATTCACTTATAGGGGGTCCTGGATTCTCAAGGATAGTGTACTGCAACGAGGCAGAACGTGGTGAAGGGAGTTTTGTGAGTTATGGTGACAATTATGTGAGTACTACTAAGTATACAGTGGCTACTTTCCTACCCAAGTCCTTGTTTGAGCAATTCAGGAGGGTGGCCAATTTTTACTTCCTTGTCTGTGCAATTCTGTCTTTTTTCCCGGTTTCTCCTTACTCGGCTGTCAGCAATGTTATTCCTCTTGTTGTTGTGGTTTCTGCTACAATGGGGAAAGAGGCTGTTGAGGATTGGAGGAGGAAGAAGCAGGATATAGATATGAATAATAGAAAGGTTAAAATGCACCATGGAGATGGTGTTTTTGACTATTCTAAATGGAAGGATTTGAAAGTTGGAGACATAGTAAAGGTTGAAAAGGATGAATTTTTCCCTGCTGATTTAATCTTACTTTCATCAAGCTATGATGATGCAATTTGCTATGTTGAGACCATGAATCTTGATGGAGAAACAAATCTAAAAGTTAAACAAGCACTTGAAGAAACATCAAAGCTGCAAGAAGACTCAAGCTATCAAAATTTCAAGGCTATCATCAAATGCGAAGATCCAAATGCAAATTTGTACTCATTTGTGGGCAATTTGGAGCTTGAAGATCAATTGCATCCTCTAGCACCTCAGCAGCTTCTGCTTAGGGACTCAAAGCTAAGGAACACTGAGTTTATCTATGGTGCGGTAATCTTCACAGGCCATGATACAAAGGTTATGCAGAATTCAACAGAACCTCCTTCCAAGAGAAGCACAGTTGAGAAACGGATGGATAAAATTATTTACTTTCTCTTCTTTGTCTTATTTTTAATATCTTTCGTTGGTTCAATTTTCTTCGGGATTGCAACTAGGGAAGACCTTGAAAATGGAGTTATGAAGCGATGGTACCTCAGACCAGATAATACCACAATTTACTTTGATCCAAAGAAAGCACCAGTTGCAGCAATGCTGCATTTCTTGACTGCACTCATGTTGTATAGTTACTTGATTCCAATTTCTTTGTACGTTTCCATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACCAGGATTTGCATATGTATTATGAGGAAACTGACAGGCCAGCTCATGCTCGTACCTCAAATTTGAATGAAGAACTTGGCCAAGTTGACACTATACTTTCAGATAAAACAGGAACTTTGACTTGCAACTCTATGGAATTCGTCAAGTGCTCTATTGCTGGGATTGCCTATGGCCAAGGAGTTACAGAAGTTGAGAGAGCTCTAGCCAAGCAAAAAGGATTTCCTATGGGTGAAGAGTTGGCAGAAGATGGCTATGTTCCAAAGACTTCTGAAGTAAAGTCTTCCGTTAAAGGTTTTAACTTTATGGATGAAAGGATCACAAATGGAAATTGGATCAATGAACCTCATGCCGATGTAATCCACAGGTTCCTGCAGTTGTTGGCTGTATGCCATACTGCAATACCTGAAGTTGATGAAGAAAATGGGAGAGTTTCATATGAAGCTGAGTCACCTGATGAGGCAGCTTTTGTGGTTGCAGCCAGAGAACTTGGTTTTGAGTTTTATGAAAGGACACAGACAACTATCTCACTGCGTGAGTTCAATCCCAAATCAGGCAAAACAACTGAAAGGTCCTACAAACTTTTGAATATACTAGAGTTTAGTAGCACAAGAAAGCGGATGTCTGTAATTGTGTTCAAAATCTTAAATTTCTTTTTGATTGTGGCTTTTACTGTCAGTGTCATGTTTGAACGACTTGGAAGGAATGGAAGGGAGTTTGAAGAGAAGACTAAGCAGCACATTGATGAATATGCTGATGCTGGTCTGAGGACCTTGATACTTGCATATCGGGAACTTGGTGAAGAAGAGTACAATATATTCAATAAAGAATTTATGGAGGCCAACAACTTAGTAAGTGCAGATAGAGAGCAAATTGTGGAGGAAGTATCAGAAATGATTGAGAAGGAGTTAATTCTTCTTGGTGCTACTGCGGTTGAAGACAAGCTTCAAAATGGGGTTCCTGAATGCATCGACAAGCTAGCTCAGGCAGGAATTAAGCTATGGGTTCTGACTGGTGATAAAATGGAGACAGCAATCAATGTTGGCTATGCATGTAGTTTGCTCAGACAAGGAATGAAGCAAATTATAATCAGTTCAGACACTCTAGAAATCAAATCATTGGAGAAAGTGGAGGACAAGTCTGCCGCAGCAGCGGCAATCAAGGCAAGTGTTATTCTTCAACTAAAGAAAGGAAAGGAATTACTTGCTGAATATGATGAGAACTCTGAGGCATTAGCTCTTATCATTGATGGGAAGTCTCTTACTTATGCACTAGAAGATGATGTGAAGGACCTTTTTCTTGCACTTGCTGTTGGCTGTGCATCTGTCATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTCGTTACTAGACTGGTAAAGGTTAAAACTTGTAGCACAATTCTAGCAATTGGTGATGGAGCAAATGATGTTGGAATGCTTCAAGAAGCTGACATTGGGATTGGCATAAACGGTGTCGAAGGAATGCAGGCAGTTATGTCCAGTGATATTTCCATTGCCCAATTTCGGTTTCTAGAGCGTTTACTACTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCAATGATCTGCTACTTCTTTTACAAGAACATTGCCTTTGGCTTCACCCTCTTCTTCTATGAGATCTACGCCTCGTTCTCAGGGCAAGCTGCATACAATGATTGGTACCTCTCACTATATAACGTATTCTTCACTTCCCTTCCGGTAATAGCCTTAGGAGTATTTGACCAGGATGTTTCTGCTAGATTATGTCTCAAGTTCCCATTATTATATCAAGAAGGTGTGCAAAATGTGTTGTTCAGCTGGAAACGGATCCTGGGTTGGGTATTTAATGGAGTATTGAGTGCTACAATAATATTCTTCTTCTGCATCAACGCAATGGAGAATCAAGCATTCCGCAAAGAAGGGGAAGTTGCTGATCTGGAAGTTCTTGGTGCAACCATGTACACTTGTGTGGTGTGGGTGGTGAATTCCCAGATGGCACTATCCATCAGTTACTTCACTTACATTCAGCATTTGTTCATATGGGGTGGCATTATTTTCTGGTACATATTCCTGATAGTGTATGGAACAATGGACCCCACTGTATCAACGACTGCCTATAAGGTATTGATTGAAGCTTGTGCACCAGCACCATCATACTGGCTCCTCACATTGCTTGTGCTTGTTGCTTCACTCCTTCCGTACTTCGCCTATTCTTCAATCCAAATGAGGTTCTTCCCCATGTTCCATCAGATGATACAGTGGATTCGAAATGATGGGCAAACGACTGACCCAGAATACGTTCATGTTGTCAGACAGAGATCAATAAAACACACAACAGTTGGCTTCACGGCTCGTTTTGAAGCATCAAAGAGTATTCAAGTTTGA 3564 0.4071 MSGNGRKRRHFSRIHAFSCGKASFKGEHSLIGGPGFSRIVYCNEAERGEGSFVSYGDNYVSTTKYTVATFLPKSLFEQFRRVANFYFLVCAILSFFPVSPYSAVSNVIPLVVVVSATMGKEAVEDWRRKKQDIDMNNRKVKMHHGDGVFDYSKWKDLKVGDIVKVEKDEFFPADLILLSSSYDDAICYVETMNLDGETNLKVKQALEETSKLQEDSSYQNFKAIIKCEDPNANLYSFVGNLELEDQLHPLAPQQLLLRDSKLRNTEFIYGAVIFTGHDTKVMQNSTEPPSKRSTVEKRMDKIIYFLFFVLFLISFVGSIFFGIATREDLENGVMKRWYLRPDNTTIYFDPKKAPVAAMLHFLTALMLYSYLIPISLYVSIEIVKVLQSIFINQDLHMYYEETDRPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGIAYGQGVTEVERALAKQKGFPMGEELAEDGYVPKTSEVKSSVKGFNFMDERITNGNWINEPHADVIHRFLQLLAVCHTAIPEVDEENGRVSYEAESPDEAAFVVAARELGFEFYERTQTTISLREFNPKSGKTTERSYKLLNILEFSSTRKRMSVIVFKILNFFLIVAFTVSVMFERLGRNGREFEEKTKQHIDEYADAGLRTLILAYRELGEEEYNIFNKEFMEANNLVSADREQIVEEVSEMIEKELILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINVGYACSLLRQGMKQIIISSDTLEIKSLEKVEDKSAAAAAIKASVILQLKKGKELLAEYDENSEALALIIDGKSLTYALEDDVKDLFLALAVGCASVICCRSSPKQKALVTRLVKVKTCSTILAIGDGANDVGMLQEADIGIGINGVEGMQAVMSSDISIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEIYASFSGQAAYNDWYLSLYNVFFTSLPVIALGVFDQDVSARLCLKFPLLYQEGVQNVLFSWKRILGWVFNGVLSATIIFFFCINAMENQAFRKEGEVADLEVLGATMYTCVVWVVNSQMALSISYFTYIQHLFIWGGIIFWYIFLIVYGTMDPTVSTTAYKVLIEACAPAPSYWLLTLLVLVASLLPYFAYSSIQMRFFPMFHQMIQWIRNDGQTTDPEYVHVVRQRSIKHTTVGFTARFEASKSIQV 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00821 1187 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Vimu10g00821 1187 FunFam Phospholipid-transporting ATPase 697 901 - -
Vimu10g00821 1187 SUPERFAMILY Calcium ATPase, transduction domain A 144 284 IPR008250 -
Vimu10g00821 1187 SFLD p-type atpase 406 912 IPR044492 -
Vimu10g00821 1187 CDD P-type_ATPase_APLT_Dnf-like 57 1021 - -
Vimu10g00821 1187 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Vimu10g00821 1187 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 29 1150 - -
Vimu10g00821 1187 Gene3D - 701 911 IPR023214 -
Vimu10g00821 1187 NCBIfam HAD-IC family P-type ATPase 825 944 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu10g00821 1187 FunFam Phospholipid-transporting ATPase 116 286 - -
Vimu10g00821 1187 NCBIfam phospholipid-translocating P-type ATPase 55 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vimu10g00821 1187 Gene3D - 110 286 - -
Vimu10g00821 1187 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1139 IPR023298 -
Vimu10g00821 1187 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Vimu10g00821 1187 SFLD Haloacid Dehalogenase 406 912 - -
Vimu10g00821 1187 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Vimu10g00821 1187 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Vimu10g00821 1187 PRINTS P-type cation-transporting ATPase superfamily signature 747 757 - -
Vimu10g00821 1187 Gene3D - 471 700 IPR023299 GO:0000166
Vimu10g00821 1187 SUPERFAMILY HAD-like 419 916 IPR036412 -
Vimu10g00821 1187 Pfam Cation transport ATPase (P-type) 521 602 - -
Vimu10g00821 1187 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 497 667 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00821 Vimu-Chr10 7277045 7282646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g00821 1 1183 Primary Pumps ATPases AT1G68710 68.391 0.0 1750
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00821 10 7277045 7282646 Vimu10g00821 10 7277045 7282646 ECH