LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu10g00288	ATGGCTTCATCTGAGTTTGGTGAAGACGGTGATAGCAGAGGCGGTATGTGGGTTTTGGAACAGAGGATTGACCAGCCGATGGATGAAGAAGCTGAAAAGCTCAAAAACATGTACAGAGAAAAAAAATTTTCTACACTGTTGCTTCTGCGGCTTGCATATCAGAGTCTTGGAGTAGTGTATGGAGATTTGGGCACTTCCCCTTTATACGTTTTCTATAATACATTTCCTCATGGAATTGACAACCAGGAGGATGTGATTGGAGCTCTTTCTTTGATTATATACTCTCTTACTCTGGTGCCTCTGGTCAAATATGTTCTTATTGTATTACGAGCGAATGACAATGGTCAAGGTGGAACATTGGCTCTTTATTCTTTGCTCTGTCGACATGCAAATATTAGAACCATCCCCAACCAGCATCGTACGGATGAAGAGCTGACAACATATAGTCGATCTACCATCCGTGAAAAGTCATTTGCTGCAAAAACCAAGAGATGGTTAGAGGAACAACCTTATATTAAAGATATCATTCTTATTCTGGCCCTTGTTGGTACTTGCATGGTGATTGGAGATGGAATTCTTACCCCAGCTATATCTGTTTTATCTGCGGTTGGTGGCATCAAGGTAAATCACGCAGATTTGAGCAACGAAGTAGTGGTATTGGTTGCTGTTGTTATGCTAGTTGGGTTATTCAGCATGCAACATTACGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTTCTTTGGTTTCTCCTAATTGGAGGCATAGGAATCTTCAACATCTGTAAATATGACAGCAGTGTTCTAAAAGCTTTTTCACCACTGTATATATACCGCTATCTAAAACGAGGAGGTAGAGATGGTTGGACTTCCCTTGGTGGAATTTTGCTCAGCATAACTGGGACAGAGGCTCTTTTTGCAGACCTAGCCCACTTTCCAGTCTCTTCTGTACAGATTGCATTTACTCTCCTAGTCTTTCCTTGCCTTCTTTTAGCCTACTCTGGACAAGCTGCATACCTTATGCATAACTTGAATCATTCAAATGATGCGTTTTATCGTTCTATTCCAGACAAAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCAAGTCAGGCTACAATATCCGCAACCTTCTCAATTATCAAGCAAGCCAATGCTCATGGCTGTTTCCCAAGAATAAAAGTTGTACATACATCAAAGAAGTTCCTTGGCCAGATATACATTCCAGACATCAATTGGATCCTTATGATTCTATGCATTGCTGTTACGGCTGGGTTTAAAAATCAGAGTCAAATTGGAAATGCATATGGTACTGCAGTTGTGCTAGTGATGCTGGTTACAACGTTGCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCATTGGATTCTGGTTGTGGTGTTCACTGGCTTATCACTGATAGTGGAATGCACATACTTCTCTGCAGTACTCTTCAAAGTTGACCAAGGTGGATGGGCTCCCCTTGCAATTGCTGGAGCATTTCTTCTGATCATGTATGTATGGCATTATGGCACAGTGAAACGCTACGAGTTTGAAATGCACAGTAAGGTATCAATGGCATGGATTCTTGGACTTGGACCAAGTTTAGGACTTGTTCGTGTCCCAGGAATAGGGCTGGTATACACAGAGCTTGCAAGTGGAGTACCCCACATATTTTCTCACTTCATCACAAACCTACCAGCTATTCATTCTGTTGTTGTTTTTGTATGTGTGAAGTATCTTCCTGTCTACACTGTCCCAGAAGAAGAAAGGTTCCTTGTGAAGAGGATTGGACCAAAGAACTTCCACATGTTTCGTTGCGTTGCAAGGTACGGATACAAAGATTTGCACAAGAAAGATGAGGACTTTGAGAAAAAGCTTTTCCATAACCTTTTTGTGTTTGTTAAGTTGGAGTCTATGATGGAGGGATGCTCAGATTCAGATGACTACAGTCTATATGAACAGCAAACTGAGATATCAAGAGAAGGTCTACTACTGAACAATAATGCAATCACATCATCAACGAATATGGATCCAACAGTTTCTTCTTTGGATTCTATAGTGTCAGTTACTTCACCATCACACTTGAATGCTACTGTTAGATCCTCTGGTCATGTGAGCAACCAAACTGAGGTTGATGAAGTTGAGTTTTTGAACAGTTGCAGAGATGCTGGGGTGGTTCACATACTCGGAAACACAGTTGTGAGGGCTAGCAGGGATTCAAGATTCTACAAGAAAATAGCTGTGGATTATATATATGCATTTCTCAGGAAGATATGCAGAGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGGTTTTCTATGTATAG	2376	0.4099	MASSEFGEDGDSRGGMWVLEQRIDQPMDEEAEKLKNMYREKKFSTLLLLRLAYQSLGVVYGDLGTSPLYVFYNTFPHGIDNQEDVIGALSLIIYSLTLVPLVKYVLIVLRANDNGQGGTLALYSLLCRHANIRTIPNQHRTDEELTTYSRSTIREKSFAAKTKRWLEEQPYIKDIILILALVGTCMVIGDGILTPAISVLSAVGGIKVNHADLSNEVVVLVAVVMLVGLFSMQHYGTDRVGWLFAPIVLLWFLLIGGIGIFNICKYDSSVLKAFSPLYIYRYLKRGGRDGWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLLVFPCLLLAYSGQAAYLMHNLNHSNDAFYRSIPDKIYWPVFVVATAAAIVASQATISATFSIIKQANAHGCFPRIKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVLVMLVTTLLMILIMILVWRCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGAFLLIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDEDFEKKLFHNLFVFVKLESMMEGCSDSDDYSLYEQQTEISREGLLLNNNAITSSTNMDPTVSSLDSIVSVTSPSHLNATVRSSGHVSNQTEVDEVEFLNSCRDAGVVHILGNTVVRASRDSRFYKKIAVDYIYAFLRKICRENSVIFNVPHESLLNVGQVFYV	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu10g00288	791	Pfam	K+ potassium transporter	53	623	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vimu10g00288	791	NCBIfam	potassium uptake protein	51	791	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Vimu10g00288	791	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	33	789	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu10g00288	Vimu-Chr10	1853226	1856553	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu10g00288	10	1853226	1856553	Vimu10g00288	10	1853226	1856553	ECH