Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00285 ATGGTGAGAGAGAGAGAGAGAGACATCATGGGCACATACTCATCATCAAGAGGGTGTGGTGGGGGAGACATGAATGAGAAACCTGCATGGCTAGAGAGGTTGATGGCTGAGACATTCTTTGGTGCTTGTGGGGTCCACCAGGATCGCAGGAAGAACGAGAAGAACGTCTTTTGCTTGCACTGTTGCCTTAGCATCTGCCCCCACTGCCTCTCTTCCCACCGTTCTCACCCTCTACTCCAGCTCTCTTTTTTATCCATTTCTCCCTCCAAAGGTTTCTCAGCTGTTCCTTTCATTGAAAGTGAAAAGTTTGACCCACTGGTTCCCAATTCATGCTGTGTCTCATTATTGAATAATTTGCACAGAAAATCACCAATAATGAGAGGCTCTAATACCATGCCACAGGTGCGAAGGTATGTTTATCACGACGTGATTCGATTAGATGATCTGGAAAAACTCATTGATTGTTCCAATATTCAGCCCTATACTATAAACAGTGCCAAAGTAATATTCTTAAATCAGAGGCCACAATCAAGGACATGCAAAGGTCCTGCCAATGCTTGCTTCACTTGTGACAGGATTCTTCAGGAGCCATTTCATTTCTGTTCTCTATCATGCAAGTTCGAGGGTTTAAGAGTGGATGGTTCAGAGGTAACTGACGAAGATACCCAAATTGCCCCTAGCTCCTCTTACTCCAACACTGAGGCCACCAGCAATTCCGTAATTTCATGTGAACCTAATAACAACGTGAAGAAGGGCAAGGGCAACAACACCTTCCTTCCAGGGATCGTCCTTTCTCTTGGCAGTAGAAGAAAGGGTGCCCCTCACAGGGCCCCCCTCTCCTGA 843 0.4614 MVRERERDIMGTYSSSRGCGGGDMNEKPAWLERLMAETFFGACGVHQDRRKNEKNVFCLHCCLSICPHCLSSHRSHPLLQLSFLSISPSKGFSAVPFIESEKFDPLVPNSCCVSLLNNLHRKSPIMRGSNTMPQVRRYVYHDVIRLDDLEKLIDCSNIQPYTINSAKVIFLNQRPQSRTCKGPANACFTCDRILQEPFHFCSLSCKFEGLRVDGSEVTDEDTQIAPSSSYSNTEATSNSVISCEPNNNVKKGKGNNTFLPGIVLSLGSRRKGAPHRAPLS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00285 280 Pfam PLATZ transcription factor 136 206 IPR006734 -
Vimu10g00285 280 MobiDBLite consensus disorder prediction 220 238 - -
Vimu10g00285 280 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 25 279 - -
Vimu10g00285 280 MobiDBLite consensus disorder prediction 218 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00285 Vimu-Chr10 1817587 1822017 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vimu10g00285 PLATZ 3.6e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00285 10 1817587 1822017 Vimu10g00285 10 1817587 1822017 ECH