Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g00271 ATGCAGATACATGGGGGGACGATAAGAGCCTCAGATGGTTTTCCAGCAGATAGCTATATCATTGATTTGTCACCCTCTTCCAATGAAGGAAACATAAATAGTTCTTCAGATTCCTACAATTTTGAGTACATAACTCTCAAAGATCTCTTGTTGGACTCAAACTTTAGGGGAGGAGGCATTTCAGTGATAAACTCACTTCGGATTAGCATAGACAATTGTTACATCACACATTTCACCACTAATGGAATTTTAGTCGAAAAAGGCCATGAAACCTACATCAGAAACACTTTCCTTGGTCAGCATATAACTGCTGGTGGGGACAAAAATGAAAGAAACTTCTCAGGCACAGGAATAAACCTCCAGGGTAATGACAATGCCGTCACAGATGTTGTAATTTTCTCTGCTGCTATAGGGATAATGGTTACTGGTCAAGCCAACGCATTTTCTGGTGTACATTGTTACAACAAAGCCACTGGCTTTGGAGGTACAGGGATTTATTTGAAACTACCTGGATTAACACAAACTAGAATTGTGAATTCTTACATGGATTACACGAATATTGTGGTTGAAGACCCTGTTCAGTTCCATGTTTCTAGTTGTTTCTTCCTTGGTGATGCCAACATTGTCCTAAAGTCTAAGAATGGGGTTATAAATGGTGTTGATATTGTTGATAACTTGTTCTCGGGTTCAGATCATGGGGTTGAAATTGTTCAGCTGGACCAATCCAATAATCCTTTCCATCAAATTGAACGAGTTACTGTTGACAGAAACAATGCAAGAGGGATGAAGTTAAAGGCCACAGTTGCAAAAGGGTCCATGCAAGGGAATGGAACCTCATGGACTGTTGATTTTAACAATGTTTTACTTTTTCCCAACCTTATAAAACATGTTCAGTACTCTCTAAGCACCCCTGGCAGTACCTTCCCGAATCATATTCTAAGGAATGTGTCTGAGAATCGTGTTGTGATTGAAACAAACGAAGCAGTGCCTGCCAGTGTTTTTGTAACGGTTGATCAAAGTGAGACAAGTTGA 1032 0.3983 MQIHGGTIRASDGFPADSYIIDLSPSSNEGNINSSSDSYNFEYITLKDLLLDSNFRGGGISVINSLRISIDNCYITHFTTNGILVEKGHETYIRNTFLGQHITAGGDKNERNFSGTGINLQGNDNAVTDVVIFSAAIGIMVTGQANAFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDYTNIVVEDPVQFHVSSCFFLGDANIVLKSKNGVINGVDIVDNLFSGSDHGVEIVQLDQSNNPFHQIERVTVDRNNARGMKLKATVAKGSMQGNGTSWTVDFNNVLLFPNLIKHVQYSLSTPGSTFPNHILRNVSENRVVIETNEAVPASVFVTVDQSETS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g00271 343 SMART pbh1 122 143 IPR006626 -
Vimu10g00271 343 SMART pbh1 65 87 IPR006626 -
Vimu10g00271 343 SMART pbh1 212 238 IPR006626 -
Vimu10g00271 343 SMART pbh1 244 266 IPR006626 -
Vimu10g00271 343 SUPERFAMILY Pectin lyase-like 39 334 IPR011050 -
Vimu10g00271 343 PANTHER POLYGALACTURONASE QRT3 3 341 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g00271 Vimu-Chr10 1695875 1699560 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g00271 10 1695875 1699560 Vimu10g00271 10 1695875 1699560 ECH