Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifaun14540g00001 ATGGAATCGTGTCTAACAGAGACGAAAACTCATGAGGGTTTACCAGTTTCCGTTTCACCAGGAGGTGGTGCGGGAATTACCAAGAAGAAATGGTCGAGTTTGTTGCCTTTATTTGTGGCTCTTGTGGTCATTGCAGAGATCGCGTTTTTGGGGAAGTTGGATATGGCGAAGAATGCAGCTATGGTGGCTGACTTGTTCTATCGATCTCGTGTGGCTGTTGATAGTGATGATTTGGGGTTAGAGATGGTGGTTGGTGAGAGAAATTTGGATTCAAAGAAAGAAAGCTGTGAGGAATGGTTGGAGAGAGTGGATGCTGTTACATATTTAAGGGACTTTGTTAAGGAACCTGTTTTTATTACTGGAGCTGAACAGGAGTGGAGGTCATGTGCAGTGGGATGTAAGTTTGGGTTTAATGGGAATCAGAGACCTGATGCTACATTTGGCTTACCTCAACAAGCTGGAACGGAAAGTGTTCTGAGATCAATGGAATCGGCACAGTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAAGGGATATAACATTGTAATGACAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCTGAGTATAACATCATGGGACCGGTAGAGCCAAAAACAGAAAAAGCTCTTGCAGCTGCGTTCATTTCCAACTGCGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTCGAAAGAACAAACATCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGAACAAAGTTGAAACTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTCGCTGGAACTATCCCTGTGGTTGTTGGTGCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGGTTCGGTTTTACATATTAAAGAGCTAAAGGATGCCGAGTCTGTTGCCAAGACCATGAGATACTTAGCAGAAAACCCAGAAGCATATAATCAATCAATGAGGTGGAAGTTTGACGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACCACGAGTAGAGAGAACGAAGAAAAGAGACCGGACTTCAAGAAGCGCCCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATGTATGTGAGAGAAAGGGGGAGATTTGAGATGGAGTCCATTTACTTGAGATCCAGCAATTTAACTATAGAGGCCTTAAAGTCTGCTGTTCTTAAGAAGTTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCTGAAGTTCTAAAAGGTGGCAATGAATTAAAGATTTACAGAATACACCCTGTGGGATTGACACAAAGGCAAGCTCTTTATACCTTCGAGTTCGACGGGGATGTTGATTTCAGGGGTCACATGGAAAGCAATCCTTGTGCCAAATTTGAAGTCATTTTTGTGTAG 1521 0.4326 MESCLTETKTHEGLPVSVSPGGGAGITKKKWSSLLPLFVALVVIAEIAFLGKLDMAKNAAMVADLFYRSRVAVDSDDLGLEMVVGERNLDSKKESCEEWLERVDAVTYLRDFVKEPVFITGAEQEWRSCAVGCKFGFNGNQRPDATFGLPQQAGTESVLRSMESAQYYPENNLAMARRKGYNIVMTTSLSSDVPVGYFSWAEYNIMGPVEPKTEKALAAAFISNCGARNFRLQALEALERTNISIDSYGGCHRNRDGRVNKVETLKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPSPGSVLHIKELKDAESVAKTMRYLAENPEAYNQSMRWKFDGPSDSFKALVDMAAVHSSCRLCIHLATTSRENEEKRPDFKKRPCKCTRGSETVYHMYVRERGRFEMESIYLRSSNLTIEALKSAVLKKFTSLNHVPVWKSERPEVLKGGNELKIYRIHPVGLTQRQALYTFEFDGDVDFRGHMESNPCAKFEVIFV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifaun14540g00001 506 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 42 455 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vifaun14540g00001 506 Gene3D - 160 354 IPR038577 -
Vifaun14540g00001 506 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 163 355 - -
Vifaun14540g00001 506 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 214 382 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vifaun14540g00001 506 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 107 382 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifaun14540g00001 10 506 Xyloglucan Fucosyltransferase1 AT3G19280 65.737 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifaun14540g00001 K00753 - gmx:100776065 817.764