Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02610 ATGGGTCTCGTTTCGAATCAACGAGGCTCTAGAACAGAGACGAAAACCCATGAGGGTTTACCAGTTTCCGTTTCACCAGGAGGTGGTGCGGGAATTACCAAGAAGAAATGGTCGAGTTTGTTGCCTTTATTTGTGGCTCTTGTGGTCATTGCAGAGATCGCGTTTTTGGGGAAGTTGGATATGGCGAAGAATGCAGCTATGGTGGCTGACTTGTTCTATCGATCTCGTGTGGCTGTTGATAGTGATGATTTGGGGTTAGAGATGGTGGTTGGTGAGAGAAATTTGGATTCAAAGAAAGAAAGCTGTGAGGAATGGTTGGAGAGAGTGGATGCTGTTACATATTTAAGGGACTTTGTTAAGGAACCTGTTTTTATTACTGGAGCTGAACAGGAGTGGAGGTCATGTGCAGTGGGATGTAAGTTTGGGTTTAATGGGAATCAGAGACCTGATGCTACATTTGGCTTACCTCAACAAGCTGGAACGGATAGTGTTCTAAGATCAATGGAATCGGCACAGTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAAGGGATATAACATTGTAATGACAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCTGAGTATAACATCATGGCACCGGTAGAGCCAAAAACAGAAAAAGCTCTTGCAGCTGCGTTCATTTCCAACTGCGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAGAACAAACATCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGCAGTGAACAAAGTTGAAACTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTCGCTGGAACTATCCCTGTGGTTGTTGGTGCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGGTTCGGTTTTACATATTAAAGAGCTAAAGGATGCCGAGTCTGTTGCCAAGACCATGAGATACTTAGCAGAAAACCCAGAAGCATATAATCAATCAATGAGGTGGAAGTTTGACGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACCACGAGTAGAGAGAACGAAGAAAAGAGACCGGACTTCAAGAAGCGCCCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATGTATGTGAGAGAAAGGGGGAGATTTGAGATGGAGTCCATTTACTTGAGATCCAGCAATTTAACTATAGAGGCCTTAAAGTCTGCTGTTCTTAAGAAGTTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCTGAAGTTCTAAAAGGTGGCAATGAATTAAAGATTTACAGAATACACCCTGTGGGATTGACACAAAGGCAAGCTCTTTATACCTTCGAGTTCGACGGGGATGTTGATTTCAGGGGTCACATGGAAAGCAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1542 0.4345 MGLVSNQRGSRTETKTHEGLPVSVSPGGGAGITKKKWSSLLPLFVALVVIAEIAFLGKLDMAKNAAMVADLFYRSRVAVDSDDLGLEMVVGERNLDSKKESCEEWLERVDAVTYLRDFVKEPVFITGAEQEWRSCAVGCKFGFNGNQRPDATFGLPQQAGTDSVLRSMESAQYYPENNLAMARRKGYNIVMTTSLSSDVPVGYFSWAEYNIMAPVEPKTEKALAAAFISNCGARNFRLQALEALERTNISIDSYGGCHRNRDGRAVNKVETLKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPSPGSVLHIKELKDAESVAKTMRYLAENPEAYNQSMRWKFDGPSDSFKALVDMAAVHSSCRLCIHLATTSRENEEKRPDFKKRPCKCTRGSETVYHMYVRERGRFEMESIYLRSSNLTIEALKSAVLKKFTSLNHVPVWKSERPEVLKGGNELKIYRIHPVGLTQRQALYTFEFDGDVDFRGHMESNPCAKFEVIFV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02610 513 Gene3D - 165 361 IPR038577 -
Vifa6g02610 513 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 389 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vifa6g02610 513 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 48 462 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vifa6g02610 513 MobiDBLite consensus disorder prediction 1 25 - -
Vifa6g02610 513 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 169 362 - -
Vifa6g02610 513 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02610 Vifa-Chr6 897221409 897224730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02610 1 513 Xyloglucan Fucosyltransferase1 AT3G19280 65.058 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02610 K00753 - gmx:100792811 830.476