Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02609 ATGGGTCTCGTTTCGAATCAACGAGGCTCTAGAACAGAGACGAAAACCCATGAGGGTTTACCAGTTTCCGTTTCACCAGGAGGTGGTGCGGGAATTACCAAGAAGAAATGGTCGAGTTTGTTGCCTTTATTTGTGGCTCTTGTGGTCATTGCAGAGATCGCGTTTTTGGGGAAGTTGGATATGGCGAAGAATGCAGCTATGGTGGCTGACTTGTTCTATCGATCTCGTGTGGCTGTTGATAGTGATGATTTGGGGTTAGAGATGGTGGTTGGTGAGAGAAATTTGGATTCAAAGAAAGAAAGCTGTGAGGAATGGTTGGAGAGAGTGGATGCTGTTACATATTTAAGGGACTTTGTTAAGGAACCTGTTTTTATTACTGGAGCTGAACAGGAGTGGAGGTCATGTGCAGTGGGATGTAAGTTTGGGTTTAATGGGAATCAGAGACCTGATGCTACATTTGGCTTACCTCAACAAGCTGGAACGGATAGTGTTCTAAGATCAATGGAATCGGCACAGTACTATCCAGAGAACAATCTTGCCATGGCACGACGGAAGGGATATAACATTGTAATGACAACTAGTCTATCATCTGATGTTCCTGTTGGATATTTTTCCTGGGCTGAGTATAACATCATGGCACCGGTAGAGCCAAAAACAGAAAAAGCTCTTGCAGCTGCGTTCATTTCCAACTGCGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAGAACAAACATCTCTATTGACTCTTATGGTGGTTGTCATAGGAACCGTGATGGAAGAGTGAACAAAGTTGAAACTCTGAAGCACTACAAATTTAGCTTAGCATTTGAAAATTCTAACGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTCGCTGGAACTATCCCTGTGGTTGTTGGTGCTCCAAATATTCAAGATTTTGCTCCTTCTCCTGGTTCGGTTTTACATATTAAAGAGCTAAAGGATGCCGAGTCTGTTGCCAAGACCATGAGATACTTAGCAGAAAACCCAGAAGCATATAATCAATCAATGAGGTGGAAGTTTGACGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATTCACTTGGCCACCACGAGTAGAGAGAACGAAGAAAAGAGACCGGACTTCAAGAAGCGCCCTTGCAAGTGCACTCGAGGGTCAGAAACTGTATATCATATGTATGTGAGAGAAAGGGGGAGATTTGAGATGGAGTCCATTTACTTGAGATCCAGCAATTTAACTATAGAGGCCTTAAAGTCTGCTGTTCTTAAGAAGTTCACATCCCTGAATCATGTTCCTGTATGGAAGTCTGAAAGACCTGAAGTTCTAAAAGGTGGCAATGAATTAAAGATTTACAGAATACACCCTGTGGGATTGACACAAAGGCAAGCTCTTTATACCTTCGAGTTCGACGGGGATGTTGATTTCAGGGGTCACATGGAAAGCAATCCTTGTGCCAAGTTTGAAGTCATTTTTGTGTAG 1539 0.434 MGLVSNQRGSRTETKTHEGLPVSVSPGGGAGITKKKWSSLLPLFVALVVIAEIAFLGKLDMAKNAAMVADLFYRSRVAVDSDDLGLEMVVGERNLDSKKESCEEWLERVDAVTYLRDFVKEPVFITGAEQEWRSCAVGCKFGFNGNQRPDATFGLPQQAGTDSVLRSMESAQYYPENNLAMARRKGYNIVMTTSLSSDVPVGYFSWAEYNIMAPVEPKTEKALAAAFISNCGARNFRLQALEALERTNISIDSYGGCHRNRDGRVNKVETLKHYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPSPGSVLHIKELKDAESVAKTMRYLAENPEAYNQSMRWKFDGPSDSFKALVDMAAVHSSCRLCIHLATTSRENEEKRPDFKKRPCKCTRGSETVYHMYVRERGRFEMESIYLRSSNLTIEALKSAVLKKFTSLNHVPVWKSERPEVLKGGNELKIYRIHPVGLTQRQALYTFEFDGDVDFRGHMESNPCAKFEVIFV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02609 512 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 169 361 - -
Vifa6g02609 512 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 113 388 - -
Vifa6g02609 512 Gene3D - 165 360 IPR038577 -
Vifa6g02609 512 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 48 461 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vifa6g02609 512 MobiDBLite consensus disorder prediction 1 25 - -
Vifa6g02609 512 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 220 388 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02609 Vifa-Chr6 897221409 897224730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02609 1 512 Xyloglucan Fucosyltransferase1 AT3G19280 65.184 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02609 K00753 - gmx:100792811 835.099