Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01969 ATGAAAGGAGGGATTCATGAGAAACATCTACCTGCATGGTTAGAGAGATTAATGGGTGAAACATTCTTTGGTGGTTGTGGGGTCCACCAAGATAGAAAGAAGAACGAGAAGAACGTCCTTTGCTTACACTGTTGTCTCTCTATATGTCCTCACTGTCTCCCTTCCCACCGCCATCACCCTCTCCTCCAGGTGAGAAGGTATGTTTATCATGACGTGGTTCGATTGAGTGATCTTGAAAAGCTCATAGATTGTTCCAATATTCAAGGATATACGATTAACGGTGCTAAAGTGATATTCTTAAAAGAGAGGGTTCAGTCAAGGTCATGCAAAGATACTGCCAACGTTTGCTGCTCTTGTGACAGGATTCTCCAGGAGCCCTTCCATTTCTGTTCTCTCTCATGCAAGGTTGATTTCATGGTATGCAAGGGTGAACGATTATCGAGCATATTACATCGATACAATGAATCAGATTTTTCATATTACTCCCAGTTCGAGGGTTTAAGGGTTGATAGCTCTGAAGTTATTGATGAAGATAATGCCCATTTTGCCCCTACTACTGAAGAAGCTACAAGCCATTCTATGAATAATACTGTTTCATCATGTGAACAAGAACTCGAGAATAATAAAGCCAATGGTAATTTGTTCCTCTCTCATGGAAGCTGCAGGAGAAAGAGTGCCCCTACGAGAGCTCCACTCTCCTAG 702 0.4217 MKGGIHEKHLPAWLERLMGETFFGGCGVHQDRKKNEKNVLCLHCCLSICPHCLPSHRHHPLLQVRRYVYHDVVRLSDLEKLIDCSNIQGYTINGAKVIFLKERVQSRSCKDTANVCCSCDRILQEPFHFCSLSCKVDFMVCKGERLSSILHRYNESDFSYYSQFEGLRVDSSEVIDEDNAHFAPTTEEATSHSMNNTVSSCEQELENNKANGNLFLSHGSCRRKSAPTRAPLS 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01969 233 Pfam PLATZ transcription factor 65 136 IPR006734 -
Vifa6g01969 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01969 Vifa-Chr6 728248842 728250916 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vifa6g01969 PLATZ 2.7e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01969 6 728248842 728250916 Vifa6g01969 6 728248842 728250916 ECH