Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01963 ATGGTGAAATATGTTATATTTGATAAAACAGGAACTCTAACTCAGGGGAAAGCCAATGTCTCTGTTGCCAAGGTGTTTGCAGGAATGGATCGAGGAGAATTTCTTAAATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCGCTGGCAAAAGCAATATTACAATACGCACGCCATTTTCACTTCTTTGATGAGTCCTCTCTTACTAATGGTCCTCGAAATGATGCCAATGAATTAAAATCAGGGTGGCTTTATGATGCCTCAGATTTCTCTGCTATTCCAGGAAAGGGTGTGCAGTGCATTATAGATGGACAGCGTGTTTTGGTTGGTAACAGGAAGCTGCTGGTGGAAAGTGGTATAAACATCTCTACCGAAGCGGAAAATTTTGTTGTTGAGCTTGAAGAAAGTGCCAAGACAGGGATCCTGGTAGCATGTGACGGTATATTGATTGGAGTTTTGGGGGTTGCAGACTCACTTAAACGAGAAGCTTCTGTTGTTATAGAGGGCCTCAAGAAAATGGGAATCACGCCTGTAATGGTTACAGGAGATAACTGGAGAACAGCCCGAGCTGTTGCCAAGGAGGTTGGCATTCAAGATGTTAGAGCAGAGGTTATGCCTGCAGGAAAGGCTGATGTTGTTCGTTCATTCCAAAAAGATGGAAGTATAGTTGCAATGGTGGGCGATGGTATAAATGACTCTCCTGCATTAGCTGCTGCAGATGTTGGCATGGCAATTGGGGCTGGGACAGATATTGCCATAGAAGCTGCTAACTATGTTTTGATGAGAGATAATTTGGAAGACGTGATCACAGCAATTGATCTTTCTAAAAAGACCTTTTCTCGTATTCGATTGAATTATGTATTCGCGATGGCCTACAATATTATAGCCGTACCAGTTGCTGCGGGTGTTTTATTTCCTTCACTGGGAATCAAGCTTCCACCATGGGTTGCTGGTGCATGCATGGCTCTCTCGTCTGTGAGTGTTGTATGTTCTTCTTTGCTTCTTAGAAGATATAGAAAACCCAGACTTACTACAATACTTGAAATAGTTGTAAATTAA 1059 0.4278 MVKYVIFDKTGTLTQGKANVSVAKVFAGMDRGEFLKLVASAEASSEHPLAKAILQYARHFHFFDESSLTNGPRNDANELKSGWLYDASDFSAIPGKGVQCIIDGQRVLVGNRKLLVESGINISTEAENFVVELEESAKTGILVACDGILIGVLGVADSLKREASVVIEGLKKMGITPVMVTGDNWRTARAVAKEVGIQDVRAEVMPAGKADVVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDIAIEAANYVLMRDNLEDVITAIDLSKKTFSRIRLNYVFAMAYNIIAVPVAAGVLFPSLGIKLPPWVAGACMALSSVSVVCSSLLLRRYRKPRLTTILEIVVN 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01963 352 ProSitePatterns E1-E2 ATPases phosphorylation site. 8 14 IPR018303 -
Vifa6g01963 352 PRINTS H+-transporting ATPase (proton pump) signature 257 282 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifa6g01963 352 PRINTS H+-transporting ATPase (proton pump) signature 198 214 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifa6g01963 352 PRINTS H+-transporting ATPase (proton pump) signature 226 242 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifa6g01963 352 FunFam Probable copper-transporting ATPase HMA5 144 283 - -
Vifa6g01963 352 SUPERFAMILY HAD-like 5 332 IPR036412 -
Vifa6g01963 352 Gene3D - 1 283 IPR023214 -
Vifa6g01963 352 FunFam Copper-transporting ATPase RAN1 13 105 - -
Vifa6g01963 352 SFLD p-type atpase 2 277 IPR044492 -
Vifa6g01963 352 PRINTS P-type cation-transporting ATPase superfamily signature 249 261 - -
Vifa6g01963 352 PRINTS P-type cation-transporting ATPase superfamily signature 226 245 - -
Vifa6g01963 352 PRINTS P-type cation-transporting ATPase superfamily signature 6 20 - -
Vifa6g01963 352 PRINTS P-type cation-transporting ATPase superfamily signature 173 183 - -
Vifa6g01963 352 PRINTS P-type cation-transporting ATPase superfamily signature 151 162 - -
Vifa6g01963 352 SFLD Haloacid Dehalogenase 2 277 - -
Vifa6g01963 352 NCBIfam HAD-IC family P-type ATPase 89 309 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vifa6g01963 352 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 2 347 - -
Vifa6g01963 352 FunFam Copper-exporting P-type ATPase 106 157 - -
Vifa6g01963 352 Gene3D - 106 157 IPR023299 GO:0000166
Vifa6g01963 352 Gene3D - 14 105 IPR023299 GO:0000166
Vifa6g01963 352 Pfam haloacid dehalogenase-like hydrolase 2 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01963 Vifa-Chr6 727569838 727571543 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01963 6 727569838 727571543 Vifa6g01963 6 727569838 727571543 ECH