Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01953 ATGAGGTTCTTAGCTGTGTGTTTTGTCTTATCATTGGTGTTGGTAATAGAGGCATCAACATGTTCCAATTTTTTCACAAGAGAGGAAAAACTATCAGAGTTCAAGCACAAACTTGATCAAACATTAGCTAATCCTTCACCACCTTTGGCATCATCTTCACAAACAAACACGAGTAATAGGGTGTTGTACCTGAGTGAATATGGTGCAGACCCAACAGGATCAGAAGAGAGTAGTGATGCAATTTTGAAAGCTGTGGAGGATGCATTTAAGTTGCAAAAGGGTCTTGAATTGGTAGCAGGGGTGAACGATTTGGGAGGTGTTGTTATTGATTTGGGAGGTGGAGATTACAAAATCAGCAAACCAATTACTTTTGCACCTGGTGGTGGCAATGTTGTGGTTAAAGGAGGAACTTTGAGAGCATCTGATGCTTTTCCTGGTGACCGACATCTAGTTGAGCTGTGCTCATCAAATTCCAACAAACTCGACACAGCAGAATCTATGCAAAGTGGTAACCTCAGTGACATAAAGACACAAAACAATGGCATTTACTATGAGGACATAACTTTCAGAGACATCCTCTTTGATTCGAGTTACCGGGGAGGAGGAATATTCATTGCTGATTCCGCTAGAATCCGAATCAACAACTGTTTCTTCTTACATTTCACCACAGAAGGGATTCTAGTACAGAAAGGACATGAGACATTCATATCAAGTTGTTTTCTTGGACAACACTCAACAGTTGGTGGTGACCACGGTGAGAAGGGCTTTTCGGGGGTCGCTATTGATCTTGCTAGTAACGATAATGCAGTAACAGATGTCGCGATTTTCTCGGCAGCCATCGGTATTGTGCTTAGGGGCCAAGCTAACATTCTATCAGGGGTGCATTGTTATAACAAAGCTACAGGATTTGGCGGTATAGGTATATTAGTGAAATTAGCAGGAAATTCTCTAACTAGAATTGACAACTGTTATATGGATTATACTGGTATAGTAATGGAAGATCCTGTTCAAGTTCATGTCACTAATGGCTTATTTCTTGGGGATGCTAATATTTTACTGAAGTCGGTTAAAGGTCAGATTTTGGGGTTGAATATAGTTGATAATATGTTCAATGGCGATCCTAATAAGAAGGTTCCGATTGTGAATCTAGATGGGCAATTTAGTAATGTTGAACAAGTAGTGATTGATCGAAACAATGTAAACGGCATGGGGTTGAGATCAACGGTTGGGAAGTTAACTGTGAGCGGTAACAGCACGAAATGGGAGGCTGATTTTTCATCAGTTTTGGTATTTCCTAATCGGATTAGTCATGTTCAATATTCATTTTATGCTCAAGGGGAGCCAAAATTTGTAGCACATTCTGTTACCAATGTGTCAGATAATGTTGTAGTTGTGGAGAGTGAGAAAGAAGCCAAAGGATCGGTCTTCTTCAGAGTTGAACAATAA 1446 0.4018 MRFLAVCFVLSLVLVIEASTCSNFFTREEKLSEFKHKLDQTLANPSPPLASSSQTNTSNRVLYLSEYGADPTGSEESSDAILKAVEDAFKLQKGLELVAGVNDLGGVVIDLGGGDYKISKPITFAPGGGNVVVKGGTLRASDAFPGDRHLVELCSSNSNKLDTAESMQSGNLSDIKTQNNGIYYEDITFRDILFDSSYRGGGIFIADSARIRINNCFFLHFTTEGILVQKGHETFISSCFLGQHSTVGGDHGEKGFSGVAIDLASNDNAVTDVAIFSAAIGIVLRGQANILSGVHCYNKATGFGGIGILVKLAGNSLTRIDNCYMDYTGIVMEDPVQVHVTNGLFLGDANILLKSVKGQILGLNIVDNMFNGDPNKKVPIVNLDGQFSNVEQVVIDRNNVNGMGLRSTVGKLTVSGNSTKWEADFSSVLVFPNRISHVQYSFYAQGEPKFVAHSVTNVSDNVVVVESEKEAKGSVFFRVEQ 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01953 481 SUPERFAMILY Pectin lyase-like 64 404 IPR011050 -
Vifa6g01953 481 Gene3D - 65 475 IPR012334 -
Vifa6g01953 481 FunFam Polygalacturonase QRT3 64 476 - -
Vifa6g01953 481 PANTHER POLYGALACTURONASE QRT3 11 481 IPR039279 GO:0004650
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01953 Vifa-Chr6 724175559 724177684 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01953 6 724175559 724177684 Vifa6g01953 6 724175559 724177684 ECH