Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01949 ATGGAGGGTTTTCACCCATCTATGAATATGAATATGAGCATGAGCATGAACATGAACCCTTCTTTTTCATACTCTTTCCCTATCACTGCTACTGCTTCTGGTGCTATCACTAATATTACTACTACCACCACCACTTACAACACTACCAGTACTACTCCATGGATGAACAGCAGGATATGGAGTAAGCTTCCTCAAAGACTACTTGATCGCATCATTGCTTTCCTTCCTCCACCCGCTTTCTTTCGTGCACGTGCTGTTTGCAAGAGATTCTACTCTCTTCTCTTTTCCAACTCTTTCCTTGAATTATACCTTCAAGTTTCACCTCGTTTCCACTGGTTCATATTCTTCAAACACAAAACCAGATCAAAAACCCACATCTACAAAAACAACAGCACCACTGATAATAATTCCTTTGAAGGCTACGTCTTTGATCCAAATGAAGTGACATGGTACCGTGTTTCCTTTGCTTTGATCCCTTCTGGTTTTTCACCGTCTTCTTCATCTGCTGGTTTACTCTGCTGGGTTTCTGATGAGTCCGGTCCAAAAACAATGCTTCTCTCAAACCCAATACTCGGTTCCATTACTCAGTTACCACCAACTTTAAGACCAAGACTCTTCCCTTCAATAGGTTTAACCATTACTCCATCTTCCATAGATGTTACTGCTGCAGGTGATGACATGATATCACCTTATGCAGTAAAAAATCTATCATCTGAAAGCTTTCATATCGATGCAAGTGGGTTTTATTCCATTTGGGGAACAACCTCTTCTTTACCAAGACTATGCAGTCTTGAATCTGGTAGAATGGTTTATTCACAAGGGAAATTTTACTGCATGAACTGTAGTCCTTTTAGTGTTTTAGCTTATGATATAGCTACAAACACCTGGTTCAAAATTCAAGCTCCTATGAGGAGGTTTTTAAGGTCACCTAATTTGGTTGAATGCAAAGGAAAGTTGTTACTAGTTGCTGCGGTTGAGAAAAGTAAGCTGAATGTTCCAAAAAGTTTGAGGGTTTGGAGTTTGCAAGGCTGTGGAAGTGTGTGGGTGGAAACTGAGAGAATGCCACAACAACTTTATGTTCAGTTTGCTGAGATGGAAAATGGGAATGGATTTGAGTGTGTTGGGAATGGTGAGTTCATTGTGATAATGATAAAAGGGAGTGATAAGGGTTTGGTGTATGATATAGGAAGGAAGAGGTGGCAGTGGATTCCACCATGTCCTTATGCTGGTTATGATGGGTTTGAGTTGCATGGTTTGGCTTATGAGCCTAGGTTGGCTACACCTGTTACTGCTCTACTTGATCAGTTGGCAATGCCTCTTCCGCAGTTTTAA 1332 0.4084 MEGFHPSMNMNMSMSMNMNPSFSYSFPITATASGAITNITTTTTTYNTTSTTPWMNSRIWSKLPQRLLDRIIAFLPPPAFFRARAVCKRFYSLLFSNSFLELYLQVSPRFHWFIFFKHKTRSKTHIYKNNSTTDNNSFEGYVFDPNEVTWYRVSFALIPSGFSPSSSSAGLLCWVSDESGPKTMLLSNPILGSITQLPPTLRPRLFPSIGLTITPSSIDVTAAGDDMISPYAVKNLSSESFHIDASGFYSIWGTTSSLPRLCSLESGRMVYSQGKFYCMNCSPFSVLAYDIATNTWFKIQAPMRRFLRSPNLVECKGKLLLVAAVEKSKLNVPKSLRVWSLQGCGSVWVETERMPQQLYVQFAEMENGNGFECVGNGEFIVIMIKGSDKGLVYDIGRKRWQWIPPCPYAGYDGFELHGLAYEPRLATPVTALLDQLAMPLPQF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01949 443 SMART fbox_2 63 103 IPR001810 GO:0005515
Vifa6g01949 443 SUPERFAMILY Galactose oxidase, central domain 134 411 IPR011043 -
Vifa6g01949 443 Gene3D - 234 424 IPR015915 GO:0005515
Vifa6g01949 443 FunFam protein UNUSUAL FLORAL ORGANS 56 100 - -
Vifa6g01949 443 ProSiteProfiles F-box domain profile. 57 106 IPR001810 GO:0005515
Vifa6g01949 443 Gene3D - 55 101 - -
Vifa6g01949 443 PANTHER BNACNNG10540D PROTEIN 44 426 - -
Vifa6g01949 443 SUPERFAMILY F-box domain 52 151 IPR036047 GO:0005515
Vifa6g01949 443 Pfam F-box domain 60 96 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01949 Vifa-Chr6 724088510 724089841 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01949 6 724088510 724089841 Vifa6g01949 6 724088510 724089841 ECH