Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01938 ATGAACTCACTGGCACCATATTCAGTTGGGACTTGCCTCACCTCTTTGCAACCCCAAAAACGTAACCATTCAATTTCAGTAACAGTAACATGTTCTATCCAAGTCCCACAACCACCACCAGTTCTTATACAAAAAGCGAATCAATTGAGCAGAAGAGACGCAATAGGCTTCTCCTTCAGTTTTGGCCTTCTTCATTCTTTATTACAACCAATAATACCAATTGCAACAGCAGCTGCTGAAGTAGCTCCATGTGAATTAACAGTAGCTCCTTCAGGCCTTTCCTTTTGTGATAAAGTTGTAGGCACTGGTCCTCAGGCTGTTAAGGGACAGCTTATTAAGGCACATTATGTAGGGAGATTGGAGAATGGAAAAGTCTTCGACAGCAGTTACAATCGCGGCAAGCCACTTACATTTCGCATTGGTGTTGGAGAGGTTATCAAAGGATGGGATGTAGGCATTTTAGGAGATGATGGAATTCCTCCTATGTTTGCAGGAGGTAAACGTACACTGAAACTTCCTCCAGAACTTGGATATGGTTCAAGGGGGGCTGGTTGTAAAGGAGGTTCATGTGTCATTCCTCCTGATTCTGTACTCTTATTTGATGTGGAGTTTGTTAGCAAAGCATGA 627 0.429 MNSLAPYSVGTCLTSLQPQKRNHSISVTVTCSIQVPQPPPVLIQKANQLSRRDAIGFSFSFGLLHSLLQPIIPIATAAAEVAPCELTVAPSGLSFCDKVVGTGPQAVKGQLIKAHYVGRLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDVGILGDDGIPPMFAGGKRTLKLPPELGYGSRGAGCKGGSCVIPPDSVLLFDVEFVSKA 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01938 208 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 109 208 IPR001179 GO:0003755
Vifa6g01938 208 Gene3D - 80 208 IPR046357 GO:0003755
Vifa6g01938 208 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 79 207 IPR044183 GO:0009507
Vifa6g01938 208 SUPERFAMILY FKBP-like 86 206 - -
Vifa6g01938 208 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 104 204 IPR001179 GO:0003755
Vifa6g01938 208 FunFam Peptidylprolyl isomerase 81 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01938 Vifa-Chr6 721102221 721103196 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01938 6 721102221 721103196 Vifa6g01938 6 721102221 721103196 ECH