Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g01905 ATGGAAAGGATTGTATGGATCCTCATCTCTCTCTCACTGTCTCTTCTCGCTACTCACGTCAGATCTGATTCCTCCGATCACCGTTACGCCGACGGCGATTCCGTTCCTCTCTACGCCAACAAAGTCGGTCCGTTTCACAATCCCAGTGAAACGTATCGTTACCTTGACCTTCCATTCTGTGTAACAGGTCATGAGAAAGAGAAGACCGAAGCGCTCGGCGAGGTTTTGAATGGAGATCGGCTTGTTAGTGCTCCGTATGAACTTCATTTTAAGAAGGAGAAAGACTCTAATGTTGTTTGCAAGAAGAAGCTTACTAGGGAGGAAGTTGCGCAGTTCCGAGAAGCGGTTAAGAAGGATTATTATTTCCAAATGTATTACGATGACTTGCCTATTTGGGGATTTATTGGTACTGTTGACAAAGAAGGAAAGAGTGATCCGAGCGAGTATAAGTATTTTCTTTATAAGCATATTCAGTTTGATGTTTTGTATAATAAGGATCGCGTGATTGAGATCAGTGCTCGTATGGATCCTCATTCTGTGGTGGATGTGACGGAGGATAAGGAAGTTGATGTTGAGTTTATGTATACTGTGAAATGGAAGGAAACAGAGATTCCTTTTGAGAAGAGAATGGAGAAATACTCACAATCTTCTTCTCTCCCGCATCACTTGGAGATTCACTGGTTCTCTATTATAAACTCGTGTGTAACAGTTCTTCTTTTGACTGGTTTCCTGGCAACCATTCTCATGCGTGTCTTGAAGAATGATTTTATGAAATATGCTCAAGACGAGGAAGCTGCTGATGATCAAGAGGAGACAGGATGGAAGTACATTCATGGGGATGTTTTCCGGTTTCCTAAGTACAAGTCCATATTCGCAGCTGCGCTTGGTTCTGGCACTCAGTTATTCACTCTCACAATCTTCATTTTTATGCTTGCACTGGTTGGTGTATTCTATCCCTACAACCGAGGAGCTTTATTTACTGCACTGGTGGTTATATATGCTCTCACATCTGGCATTGCTGGCTATACTGCTACTTCCTTCTATATTCAACTTGAAGGGACTAATTGGGTTAGAAACTTATTGCTGACAGGATGCCTCTTCTGTGGCCCTCTTTTCCTTATGTTCTGCTTCCTTAACACAGTTGCAATTGCCTATAGTGCAACTGCTGCCCTTCCTTTTGGCACAATTTGTGTGATAGTCCTAATATGGACGCTTGTAACTTCGCCATTACTTGTGTTGGGTGGCATTGCAGGTAAAAATAGTAAAACAGAGTTTCAAGCACCTGTCCGCACTACAAAATATCCCCGAGAAATTCCACCTCTGCCTTGGTACCGAAGCACCCTTCCACAGATGGCAATGGCAGGATTTCTCCCTTTCAGTGCCATCTACATAGAGTTGTACTACATTTTTGCTAGTGTGTGGGGCCACAGGATTTATACTATCTACAGCATACTCTTCATCGTCTTTATTATTCTGTTGATTGTCACTGCTTTCATTACTGTGGCTTTGACATACTTTCAACTTGCTGCGGAAGATCATGAATGGTGGTGGAGGTCTTTTCTGTGTGGTGGATCAACCGGCTTATTTATCTATGGCTACTGCTTGTATTATTACTATGCACGGTCAGATATGTCTGGTTTTATGCAAACTTCGTTCTTCTTCGGTTACATGTCTTGCATCTGCTATGGCTTCTTTCTCATGCTCGGTAGCGTAGGTTTCCGTGCTTCCTTGCTCTTTGTCCGCCACATATACAGTATAGATCCACCAATTGCTTCTTCTATGAGTGACACAACACGCAATACAACGCCGCCTCTGCCACTAACCGTGGTTCCATCTTCTTCTGCTGATACAACAATTCATTTCGGGCATATTCCATATTTTCCAAATAGATGTGCAAAGCAGCTGAGAACTCAACTGATTCTTGCCCTTCAGGCAACTCAACGACCAGTCATTAACTTCCATATAAGGTGGGATGTGGTATCCCATTGGGGAGGAAAAGCATGTCATTTTTGCAAAATCACAATGCATAAAAAGGACACGCACAAGACTGAGAGGCTTGAAATCGGATGTGACAGGAAGCCAATTATCTACCTACATACGCATTTTCTCCCTATTGCCAATTCTCCTATGGGCACCCCTAGGCACTACTTCCTTCGCACCGAGGATACTCCTCCCAGCGTAACTCAAGCTGAAACCAAGAGAGGCATCAACAAAGGAGTTTTGAGGATAGTATCTGCCTTTGAGCACCTTCCCTAA 2256 0.4331 MERIVWILISLSLSLLATHVRSDSSDHRYADGDSVPLYANKVGPFHNPSETYRYLDLPFCVTGHEKEKTEALGEVLNGDRLVSAPYELHFKKEKDSNVVCKKKLTREEVAQFREAVKKDYYFQMYYDDLPIWGFIGTVDKEGKSDPSEYKYFLYKHIQFDVLYNKDRVIEISARMDPHSVVDVTEDKEVDVEFMYTVKWKETEIPFEKRMEKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKYKSIFAAALGSGTQLFTLTIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYIQLEGTNWVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTICVIVLIWTLVTSPLLVLGGIAGKNSKTEFQAPVRTTKYPREIPPLPWYRSTLPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMSCICYGFFLMLGSVGFRASLLFVRHIYSIDPPIASSMSDTTRNTTPPLPLTVVPSSSADTTIHFGHIPYFPNRCAKQLRTQLILALQATQRPVINFHIRWDVVSHWGGKACHFCKITMHKKDTHKTERLEIGCDRKPIIYLHTHFLPIANSPMGTPRHYFLRTEDTPPSVTQAETKRGINKGVLRIVSAFEHLP 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g01905 751 SUPERFAMILY MFS general substrate transporter 223 407 IPR036259 -
Vifa6g01905 751 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 22 585 IPR004240 GO:0016020
Vifa6g01905 751 Pfam Endomembrane protein 70 51 547 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g01905 Vifa-Chr6 711000750 711010886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g01905 17 584 Miscellaneous Gene Families AT2G01970 90.493 0.0 1050
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g01905 6 711000750 711010886 Vifa6g01905 6 711000750 711010886 ECH