Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00067 ATGGATAAATTAGGGTTTAGTTTGAGGAAATTGAGAACATTACTGATTTTCAGTTTCATAGCGTTTTCTGTATTACTCATATTTAGTGTTAAACACCAAAACTCAATCTTTGATTTTGTTGGAGCATTTTCCAACATGAATCTATTGCCTGCAAATAACAACCACGATGTTACTTCTTCTTCTTCAACTGTTAAAGCAGAATCACCGGTGTTGGGAGATAAAGATCTGAACACTGTGACAGGGATCTTTCAAGAACCAAATCAGACACTAACTATCTTAGATATTGGTCCTAAAAAGAAGGATACATCGCCATCTCCTATTACCATTGCTAATGACCAATTACTTGATGGACTTCTAGTTTCCGCATTTGATGAAGTATCGTGCTTAACTACAAATTGCAAATACCTTGTCTGGACAGCTTCCAATGGATTGGGGAACAGGATGATAACCTTGGCTGCAGCATTTCTTTATGCTATCCTCACCGACCGGGTTTTACTTGTCAAATTTGGGACTGACATGTTCGCTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGTTATTGCCAAGGAATTTTCCTTATTGGAAACATCACAAACATATTGAAACTTATGAAAACATGCTAATGAATAGCAAGAAAAACAGATCAAAGGGACTTTTGCCGCAATTTCTCATTCTCAATCTACAGCACACCCATGATGGTCATAACAACTTCTTTCATTGTGATCAAAGTCAAGCTCTTCTCCATAAAGTCCCCGTTCTAATTTTGTCGTCGGATCAATATTTTGTCCCTTCCCTTTTTATGATTCCATCATTTACGCAAGAACTAAGCAAAATGTTCCCTAAGAAAGACACTGTTTTTCACCATTTGGGCCGTTACCTTTTCCACCCGTCCAATCAGGCATGGGAACTAATTAGCAGATTCTATGAGGAACACTTATCCAAGGAAAATGAGAAAATTGGCTTGCAGATTAGAGTATACAACACTCATCGAGCATCACATGAAACCATTATTAATGAAACTCTAGCCTGCACCCTTCAGCATAAGCTGCTGCCTGATATCGGTGTGCCAAAGACAGCAGCGGAATCTCATTTAAAGAAGCAGGCATCAAAAGCTGTTCTAGTGGCATCTCTATATTCTGAATATGGTGAGAAGCTGAGGACTATGTATAAGGCAAATACAACTGTGACTGGGGAGGTAATAAATGTTTATCAGCCAAGTCATGAAGGGCGTCAAAAATCAAATAATGACACGCACAATATTAAAGCATGGACGGAAATTTATCTGCTGAGTTTGTGTGATGCACTGATCACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCATAGTCTTGGAGGTTTAAAGCCATGGATTCTTGAGAGGGCATATGGGGAAACCATCCCAAATCCACCTTGTCGACGATCCAAGTCCATGGAGCCTTGTTTCCATTATCCTCCAAAGTATGATTGTATGGCCAACAACACAGTTGATTTTACTTCCCTTTTTCATCACATGAAGCATTGTGAAGATGTATCTAATGGATTGAGGTTGGTTAATACTGATCATTAG 1569 0.3913 MDKLGFSLRKLRTLLIFSFIAFSVLLIFSVKHQNSIFDFVGAFSNMNLLPANNNHDVTSSSSTVKAESPVLGDKDLNTVTGIFQEPNQTLTILDIGPKKKDTSPSPITIANDQLLDGLLVSAFDEVSCLTTNCKYLVWTASNGLGNRMITLAAAFLYAILTDRVLLVKFGTDMFALFCEPFPDSSWLLPRNFPYWKHHKHIETYENMLMNSKKNRSKGLLPQFLILNLQHTHDGHNNFFHCDQSQALLHKVPVLILSSDQYFVPSLFMIPSFTQELSKMFPKKDTVFHHLGRYLFHPSNQAWELISRFYEEHLSKENEKIGLQIRVYNTHRASHETIINETLACTLQHKLLPDIGVPKTAAESHLKKQASKAVLVASLYSEYGEKLRTMYKANTTVTGEVINVYQPSHEGRQKSNNDTHNIKAWTEIYLLSLCDALITSPKSTFGYVAHSLGGLKPWILERAYGETIPNPPCRRSKSMEPCFHYPPKYDCMANNTVDFTSLFHHMKHCEDVSNGLRLVNTDH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00067 522 Gene3D - 130 184 - -
Vifa5g00067 522 Pfam Xyloglucan fucosyltransferase 131 490 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vifa5g00067 522 Gene3D - 303 458 - -
Vifa5g00067 522 PANTHER FUCOSYLTRANSFERASE 2-RELATED 131 519 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vifa5g00067 522 FunFam Galactoside 2-alpha-L-fucosyltransferase 131 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00067 Vifa-Chr5 8337179 8339047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g00067 132 518 Xyloglucan Fucosyltransferase1 AT2G03220 49.745 1.44e-132 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00067 K13681 - gmx:100799776 694.115