Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03367 ATGAATATGCTGATAAAGAGAGTCATTGCAATCAAGAATCCAAGGGCTGATAATAATAAGCTCTCAGATTTGGAAACCCTCGCCGACAAATGTGCAACACCCCCCTTGACTTTGATGCGTCTAATGGGTTTCTTCGTTGTTTCTTTCATGCTCTTCTCTGTTCTCTTCTCACTATCCGTTGTTCTTCGAGACCCTCCCTCTGATGCCGCTACTTTCTTCCAACTCAATCAAGGTTTGGGCAGTGATGACTTTGATTCTGTTGAGTTGCTAAACGATAAACTGCTTGGTGGCCTTCTCGCTGATGGATTTCACGAAAAATCTTGCCTCAGCAGGTATCAGTCACCCATTTTCGGCAAAGGACTATCAGGAAAACCTTCTTCTTACCTTATTTCTAGACTCAGAAAATATGAAGCTCGACACAAACAGTGCGGTCCTTATACTGAATCTTATAACAAAACGGTGAAAGAATTTGGTTCTGGTCAATTTTCCGACTCCTTGGATTGTAAATATGTAGTATGGATTTCGTTTAGTGGGTTGGGAAATAGGATATTGACCCTAGTTTCAGCATTTCTTTATGCTCTCCTCACTGATCGCGTTCTACTGGTTGACCCTGGAGTGGATATGACTGATCTATTTTGTGAACCATTTCCAGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTCAACAGCCATATCAATAGTTTCAACCAGGAATCAAATCAGTGTCACGGTAAAATGCTGAAATTGAAATCAATTACAAATTCCACTGTGCCATCTTTTGTTTATCTTCATCTAGCCCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATGAAGAGCAACTTTTTCTCCAAAATATACCTTGGTTAATTATGAAAACAGATAATTATTTCATCCCATCTCTGTTCTTGATGCCATCTTTCGAGCAGGAGTTGAATGATCTCTTCCCAAAGAAAGAAAAAGTTTTCCATTTCTTGGGTAGATATCTCTTACACCCAACAAACAATGTGTGGGGACTTGTTGTCAGATACTATAATGCATACTTAGCTAAATTTGATGAGAGAATAGGCATACAAATCAGAGTGTTTGACACCGATCCCGGTCCATTTCAACATGTACTGGATCAGGTCTTAGCTTGTACTTTGAAGGAGAGTATTTTGCCTCATGTTAACCGCGAGCAGAATCTTAATCGTTCATCAGGAACACCAAAGTCAAAAGCTGTACTGATAACATCGTTAAGTTCTGGTTATTTTGAAAAGGTAAGAGACATGTATTGGGAATATCCTACAGAAACGGGAGAAGTCGTTGGCATTTACCAGCCAAGTCATGAAGGTTATCAACAAACTCAGAAGCAGTTTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACCGATGTTCTAGTTACTAGCTCATGGTCTACTTTTGGATATGTGGCTCAGGGGCTTGGAGGTTTGAAACCATGGATACTCTACAAACCAGAGAATCGAACGGCCCCAAATCCGCCTTGTCAACGTGCCATGTCAATGGAGCCATGTTTTCATGCTCCTCCCTTTTATGACTGCATGGCTAAGAGAGGAACTGACACTGGTGCACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1674 0.4098 MNMLIKRVIAIKNPRADNNKLSDLETLADKCATPPLTLMRLMGFFVVSFMLFSVLFSLSVVLRDPPSDAATFFQLNQGLGSDDFDSVELLNDKLLGGLLADGFHEKSCLSRYQSPIFGKGLSGKPSSYLISRLRKYEARHKQCGPYTESYNKTVKEFGSGQFSDSLDCKYVVWISFSGLGNRILTLVSAFLYALLTDRVLLVDPGVDMTDLFCEPFPDASWFVPPDFPLNSHINSFNQESNQCHGKMLKLKSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQLFLQNIPWLIMKTDNYFIPSLFLMPSFEQELNDLFPKKEKVFHFLGRYLLHPTNNVWGLVVRYYNAYLAKFDERIGIQIRVFDTDPGPFQHVLDQVLACTLKESILPHVNREQNLNRSSGTPKSKAVLITSLSSGYFEKVRDMYWEYPTETGEVVGIYQPSHEGYQQTQKQFHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCQRAMSMEPCFHAPPFYDCMAKRGTDTGALVPHVRHCEDMSWGLKLVDN 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03367 557 Gene3D - 166 219 - -
Vifa4g03367 557 FunFam Galactoside 2-alpha-L-fucosyltransferase 166 217 - -
Vifa4g03367 557 PANTHER FUCOSYLTRANSFERASE 2-RELATED 46 556 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vifa4g03367 557 Pfam Xyloglucan fucosyltransferase 89 527 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03367 Vifa-Chr4 1053934294 1053936152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03367 39 555 Xyloglucan Fucosyltransferase1 AT2G03220 62.885 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g03367 K13681 - gmx:100803305 845.499