Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g03142 ATGGCTCCTTCTATGTCAACAATCTACACACTCTCCTTACTTTTCTCAGTAGCTTATTCATCATCAACTGCAGAAGAATCTCCAAAACCCTTCAACAAAATATACGCCTTTGGAGACTCTTTCACAGACACCGGCAACACCCAAAACGCCGAAGGTCCAAGTGGTTTTGGCCATGTATCAAACTCACCATACGGCACAACTTTCTTCAACCATTCCACTAACAGATACTCTGATGGAAGACTAGTCATTGATTTTGTAACGGAATCACTTTCCATGCCTTATCTTCCTCCTTACCGTCACTGGCGTCAAACCAAAGGAAACGATACTTTTGGTGTTAACTTCGCTGTTGCTGGTTCAACTGCTATAAACCATCAGTTCTTTGTCAGGAACAATCTTTCTCTTGATATCACTCCTCAGTCTATTCAAACTCAGATGCTGTGGTTTAATAGGTACTTGGAAAGAGAAGGATGTGAAGGCGTTGATTCGAAGTGTAAAGACTTTGATGACACTCTTTTTTGGTTCGGTGAAATCGGTGTTAATGATTATGCTTACACTCTTGGATCTTCAATCTCACAGGATACCATAAGAAAGCTTGCAATTTCCAGTGTCACAGGAGCTTTACAGACATTGTTAGAGAAGGGTGCCAAGTACATGGTTGTGCAGGGTTTTCCACCAACCGGATGTCTTACATTGGCGATGTATTTGTCGCCCGAAGATGACAGAGACGACATAGGATGTGTGAAAACTGCGAACGATCAGAGCAACACTCACAACCTTGTACTTCAATCCAGATTACAAGAATTCAGGAAACAATATCCACATGCAGTTATAGTTTATGCTGATTACATGAATGCGTACCGAACTGTAATGCAGAATCCAAGCAAGTACGGATTCAAAGAGACGTCCAGAGTGTGTTGTGGATCAGGAGATCCACCTTACAATTTCAGTGTGTTTGCTACTTGTGGTACACCTAATGCCACCGTTTGCACTGATCCTACTCAGTATATTAATTGGGATGGTGTTCATCTTACAGAAGCTATGTATAAAGTTGTTTCTGATATGTTTCTTCAAGGAAACTTTACTCAACCTCCATTTGATTTTTTGTTGGAAAACAAAGAGAGGAATGGGTGA 1131 0.4111 MAPSMSTIYTLSLLFSVAYSSSTAEESPKPFNKIYAFGDSFTDTGNTQNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVTESLSMPYLPPYRHWRQTKGNDTFGVNFAVAGSTAINHQFFVRNNLSLDITPQSIQTQMLWFNRYLEREGCEGVDSKCKDFDDTLFWFGEIGVNDYAYTLGSSISQDTIRKLAISSVTGALQTLLEKGAKYMVVQGFPPTGCLTLAMYLSPEDDRDDIGCVKTANDQSNTHNLVLQSRLQEFRKQYPHAVIVYADYMNAYRTVMQNPSKYGFKETSRVCCGSGDPPYNFSVFATCGTPNATVCTDPTQYINWDGVHLTEAMYKVVSDMFLQGNFTQPPFDFLLENKERNG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g03142 376 CDD SGNH_plant_lipase_like 34 359 IPR035669 -
Vifa4g03142 376 Gene3D SGNH hydrolase 19 359 IPR036514 -
Vifa4g03142 376 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 362 - -
Vifa4g03142 376 SUPERFAMILY SGNH hydrolase 31 356 - -
Vifa4g03142 376 Pfam GDSL-like Lipase/Acylhydrolase 34 353 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g03142 Vifa-Chr4 994670466 994671718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g03142 21 358 Acyl Lipid Metabolism Gene Families AT4G10950 26.074 1.71e-29 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g03142 4 994670466 994671718 Vifa4g03142 4 994670466 994671718 ECH