Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02537 ATGCCGTCATCGGACTCCGGTGAGAGCCGTCGATCAATCAAACCACAAACCCGCCCCGCTGCACCTGCACCAGAGCAAGAGAATCTCCCATGTCCTCGTTGCGATTCAACCAACACCAAGTTTTGCTACTACAACAACTACAACTACTCTCAGCCTCGTCATTTCTGCAAAGCTTGCCGTAGGTACTGGACTCACGGCGGGTACTCTCCGGGACATCCCCGTCGGAGGTGGGTACCAGAAAAAACGCCAAACGCTCTCGCACTCATCATGTTGCGGTTACTTCCTCGTCTTCCTCTTCCGCTGTCACATCCGCACCACCGTCTTTTCCGTATGGTTCTGTTGACGGGAGAGGGGGAATGGAGTTTTCCTGGGATGATGGATGGATCCAACATGGGTGTGCCGGTTGTGACTTCTGGTATCGGAAACTCGTGGCAGTTAGAAGGTGGCGAAACTGGTTTTGTGGGTGGTGATTGTTTCTCTTGGCCTGGACTTGCGATTTCTACACCGGGAAATGGTCTCAAATGA 525 0.5295 MPSSDSGESRRSIKPQTRPAAPAPEQENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGYSPGHPRRRWVPEKTPNALALIMLRLLPRLPLPLSHPHHRLFRMVLLTGEGEWSFPGMMDGSNMGVPVVTSGIGNSWQLEGGETGFVGGDCFSWPGLAISTPGNGLK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02537 174 Pfam Dof domain, zinc finger 27 67 IPR003851 GO:0003677|GO:0006355
Vifa4g02537 174 ProSiteProfiles Zinc finger Dof-type profile. 29 83 IPR003851 GO:0003677|GO:0006355
Vifa4g02537 174 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 67 IPR045174 GO:0003700|GO:0006355
Vifa4g02537 174 ProSitePatterns Zinc finger Dof-type signature. 31 67 IPR003851 GO:0003677|GO:0006355
Vifa4g02537 174 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02537 Vifa-Chr4 768824904 768825576 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g02537 1 67 C2C2-Dof Transcription Factor Family AT3G50410 73.529 1.45e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Vifa4g02537 zf-Dof 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g02537 - - cam:101488684 187.578