Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g02504 ATGAAGTTCCAATTTGCATTATTGTTATGTGTATATGTTAGTGTTATTCTTTTCTTTTCCAAACACACCTTATGCATTACCATTGAAGAAGGCTTCAAAGAAGCACCAAAATTCTACAATTCCCCAACATGCAAAACCATTGTATTCTTCCATAGCAATCAACAATGCTCAATCGAAGCCGTACACGTGGCAATGACACTGGACGTGTCATACATCCGCGGCTCCATGGCAGCAATCCTCTCCGTACTCCAACACTCTTCATGTCCAGAAAACATTGTCTTCCATTTCATTGCCTCATCTTCAGAACCTTCCTCAAAAACCGTTCTAAACAGAATCATAACTAACTCATTCCCGTATTTAAAATACCAAATCTACCCTTTCAACGACGAGCCCGTCGCCGGATTGATCTCAACCTCCATCCGCTCCGCCCTCGACTGTCCCCTCAACTATGCTCGCACCTACCTCGCTGACATCCTCCCGGTCTGTATAAACAGAGTCGTTTATCTCGACTCCGACTTAATCCTCGTCGACGACATTGCAAAACTCGCTTCCACTCCTCTTCGTTCAAACACCGTCATCGCCGCACCGGAGTATTGCAATGCAAATTTCAGTATATATTTCACTCCTTCTTTCTGGTCGAATCCTTCTCTTTCACTCACATTCGCGAACCGTGAGGCGTGTTACTTCAATACCGGTGTTATGGTTATTGATCTTCAGCGGTGGCGCTCCGGTGAGTATACGACCATGATCCGGGAGTGGATGGAGTTGCAGAAGAGAATGCGGATCTATGAGCTGGGATCGTTGCCGCCGTTTTTGTTGGTTTTTGCGGGGAGGATTACGCCGGTAGATCATCGGTGGAACCAGCACGGGCTTGGTGGTGATAACTTTCGTGGGCTTTGTCGGGACCTGCACCCGGGCCCGGTGAGTTTGTTGCATTGGAGTGGAAAGGGAAAACCGTGGGCCAGGCTTGATGCTAATAGGCCTTGTCCTTTGGATGCTTTGTGGGCTCCATATGATTTACTCAAAACTCGTTTTGCTCTTGAGTCATAG 1050 0.4714 MKFQFALLLCVYVSVILFFSKHTLCITIEEGFKEAPKFYNSPTCKTIVFFHSNQQCSIEAVHVAMTLDVSYIRGSMAAILSVLQHSSCPENIVFHFIASSSEPSSKTVLNRIITNSFPYLKYQIYPFNDEPVAGLISTSIRSALDCPLNYARTYLADILPVCINRVVYLDSDLILVDDIAKLASTPLRSNTVIAAPEYCNANFSIYFTPSFWSNPSLSLTFANREACYFNTGVMVIDLQRWRSGEYTTMIREWMELQKRMRIYELGSLPPFLLVFAGRITPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLKTRFALES 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g02504 349 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 6 342 - -
Vifa4g02504 349 Pfam Glycosyl transferase family 8 62 322 IPR002495 GO:0016757
Vifa4g02504 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 62 329 IPR029044 -
Vifa4g02504 349 FunFam Hexosyltransferase 62 329 - -
Vifa4g02504 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 341 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g02504 Vifa-Chr4 756049527 756050576 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g02504 4 756049527 756050576 Vifa4g02504 4 756049527 756050576 ECH
Vifa4g02504 4 756049527 756050576 Vifa1g06958 1 1073833629 1073834684 ECH
Vifa1g06958 1 1073833629 1073834684 Vifa4g02504 4 756049527 756050576 PCT