Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00880 ATGGGTTCTGAGAAGAAGCAAAATGGAGTCATTTTGAAGGTGGAACCAAAACCGAGCAATGGATTGACTTCAAAAGCTGTTGATTTGTTGGAGAAGATTATTGTCAAGATATTTCATGATTCTTCTTCACCTCCTCATCTCTGGCTTACTGGTAATTTTGCACCTGTCAAAGATGAGACACCTCCTGTTAAGGATCTTAATGTAAAAGGCTACCTTCCGGATTGCTTGAATGGAGAGTTTGTTAGGGTGGGGCCTAATCCAAAGTTTTCTCGCGTGGCCGGATATCATTGGTTTGACGGAGATGGAATGATCCATGGTTTGCGTATCAAAGATGGAAAAGCTTCGTATGTTTCCCGCTACGTGAAGACTTCTCGTTTTAAACAAGAAGAATACTTTAAAGGCTCTAAGTTTCTGAAGATTGGAGATCTCAAAGGTCTATTTGGACTGTTAATGGTTAACATACAAATGTTACGAGCTAAATTGAAAATCTTGGATGTTTCTTATGGACACGGAACAGCTAATACAGCTCTTGTATATCACCATCAGAAGCTTCTTGCACTCTCAGAAGGAGACAAACCTTATGCTATTAAAGTTTTTGAAGACGGTGATTTGCAGACACTCGGCATGCTAGATTATGACAAGAGATTAGGCCATAACTTCACTGCTCATCCGAAAGTTGACCCATTTACTGGGGAGATGTTTACATTTGGATATTCACATACAGCACCGTATGTCACATACCGAGTAATATCAAAGGATGGTTTTATGCAAGATCCTGTTCCAATAACAATACCAGACCCCGTCTTGATGCATGACTTTGCCATCACAGAGAATTATTCAATATTTATGGACCTTCCTCTCTACTTTAGGCCAAAGGAAATGGTGAAGAATAAGACATTGATATTCTCATTTGATTCAACCCCAAAAGCTCGTTTTGGTGTACTACCTAGGTACGCTAAGGATGAGAAGCTTATCAGATGGTTTGAACTACCAAATTGCTTCATTTTCCACAATGCCAATGCTTGGGAGGAGGAGGATGAAATAGTTTTGATCACGTGCCGCATGGAGAATCCAAATTTGGACATGGTCACCGGGCCTGTCAAGGAAAAGCTTTATAATATCTCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACCGGTGAAGCTTCTCAAAAGAAACTATCAGCATCTGCTGTAGATTTTCCTAGGGTGAATGAAAGCTACATTGGCAGGAAGCAACGATACGTGTATGGGACCACGCTAGACAACATTGCTAAAGTAACTGGGATTATTAAATTTGATTTGCACGCCGAGCCAGATTCTAGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAAGGTCTCTACGACTTGGGATCAGGAAGGTTTGGCTCTGAGGCTGTTTATGTCCCGCGTGTCCCTGGCACCGATTCTGAAGAAGATGACGGATACTTGATCTTTTTTGTACATGATGAGAATACCGGGAAATCATTTGTGCACGTTATAGATGCAAAAACAATGTCAGGAGAACCTGTTGCAGTTGTAGAATTGCCTCAAAGAGTTCCATATGGTTTCCATGCTTTCTTTGTCACAGAGGAACAACTGCAAGAACAGGGTAAGTTCTAA 1629 0.4064 MGSEKKQNGVILKVEPKPSNGLTSKAVDLLEKIIVKIFHDSSSPPHLWLTGNFAPVKDETPPVKDLNVKGYLPDCLNGEFVRVGPNPKFSRVAGYHWFDGDGMIHGLRIKDGKASYVSRYVKTSRFKQEEYFKGSKFLKIGDLKGLFGLLMVNIQMLRAKLKILDVSYGHGTANTALVYHHQKLLALSEGDKPYAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTAPYVTYRVISKDGFMQDPVPITIPDPVLMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTPKARFGVLPRYAKDEKLIRWFELPNCFIFHNANAWEEEDEIVLITCRMENPNLDMVTGPVKEKLYNISNELYEMRFNMKTGEASQKKLSASAVDFPRVNESYIGRKQRYVYGTTLDNIAKVTGIIKFDLHAEPDSRKTKLEVGGNVQGLYDLGSGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKTMSGEPVAVVELPQRVPYGFHAFFVTEEQLQEQGKF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00880 542 PANTHER BETA-CAROTENE DIOXYGENASE 54 533 IPR004294 GO:0016702
Vifa4g00880 542 Pfam Retinal pigment epithelial membrane protein 53 531 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00880 Vifa-Chr4 252246974 252255265 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00880 4 252246974 252255265 Vifa4g00880 4 252246974 252255265 ECH