Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00842 ATGGGTGCTGCTTGTTGTGTTGCAGCTAGAGATAAAACTATTCAAAGTGGGCCAACTAGTGAAATCTGGCATAGGAATGCTCGTTGTTCGCCGACGTGGAGCTTGAGGTGGGATCATCGAGGCCGTGTAGCCGGAGAGGATACTAGTATAAACTGGTTTTCGGATGGTGTCAGTGGAAATGATAGGTTGGAGAATAAAAATGGATCACATGTATCTGAGGATGGAAGCCCGTCGCAGAATGATCAAAGGAATACGTGGATGAAGTCTCCGAGCTCTGAAGTAGCTGCTAGACACACAAAATCATTTTCTGATCAATCTATTCCAAGGAATGTTTCCATGGATGGGAGAATGGAACAGGTGAATGAGTTGGAAGAGTTATCGGCAGTATCATGTCCATTTCCTACAAAAACTTCACCCACATTGTCTTCTACTTCGTTGTCAATATCTCCTCTGCCATCTCAAAGCCGTCCACCTTCATCGAGCTCAACACCATTAAGGGAGCCCTCCCATTCCACAGGACACCAGTTATCACGACAGGTTTCTGATAGCCGAATCATGGGATTTAAGTCACCTAGCAATTTTGATGTATCTGAAGAAAGGCCAGTGTTTCCTTCATGGAGCAATGAATACGGTATGCACTCTGGTGGTGGATCTTCAGATTATTGCTCTAGGCCTGGCTTTACTGAGCTGACGGGCAATTCTCCCATGGAAAAATGGTCATTTAATAGCGAGTCATTTGGTTTTAATTGTGAAAGGTTGGCTAGATTCAGTAATCGGTTTTCAACTTCTCCAGTAGATTCGCAAACATGTGGTGTTTGCTCAAATCTTTTAACTGAAAAGTCTTCTTGGAGCTCTCAAAAGATCATTGTAAATAATGACCTCTGTGTAGTTTCTGTTCTTATTTGTGGACATGTCTATCATGCTGAATGTTTAGAGAGTATGACACCTGAAATCAACAAGTACGATCCAGCTTGCCCCGTTTGCACTTTTGGCGAGAAACAAGCTCGTAAATTATTTGAAAAAACTTTGAAAGCTGAAATGGATTCAAAAGCTCGAAATAAGAAATCAAGGAACCAAATTGTGGATAATGATATCGATGACGGTTCTGTTGTATTTGATCATTTTAAAGATAAAAAGCATCAAAGTAAAAGTCCTAGAATGGACTCTAGTTCTAGCAAGAGAAGCTCTTCTGGAAAACCTTTTCTGAGTAGACACTTTTCATTTGGCTCAAAGGGTTCAAAATCCATGTTAGATAATCACCCAACCCGAAAGAAGGGCTTTTTTTGGGCAAAATCTAGCAGGGAATAA 1308 0.4128 MGAACCVAARDKTIQSGPTSEIWHRNARCSPTWSLRWDHRGRVAGEDTSINWFSDGVSGNDRLENKNGSHVSEDGSPSQNDQRNTWMKSPSSEVAARHTKSFSDQSIPRNVSMDGRMEQVNELEELSAVSCPFPTKTSPTLSSTSLSISPLPSQSRPPSSSSTPLREPSHSTGHQLSRQVSDSRIMGFKSPSNFDVSEERPVFPSWSNEYGMHSGGGSSDYCSRPGFTELTGNSPMEKWSFNSESFGFNCERLARFSNRFSTSPVDSQTCGVCSNLLTEKSSWSSQKIIVNNDLCVVSVLICGHVYHAECLESMTPEINKYDPACPVCTFGEKQARKLFEKTLKAEMDSKARNKKSRNQIVDNDIDDGSVVFDHFKDKKHQSKSPRMDSSSSKRSSSGKPFLSRHFSFGSKGSKSMLDNHPTRKKGFFWAKSSRE 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00842 435 MobiDBLite consensus disorder prediction 131 190 - -
Vifa4g00842 435 SUPERFAMILY RING/U-box 265 329 - -
Vifa4g00842 435 MobiDBLite consensus disorder prediction 376 435 - -
Vifa4g00842 435 ProSiteProfiles Zinc finger RING-type profile. 270 329 IPR001841 -
Vifa4g00842 435 MobiDBLite consensus disorder prediction 131 197 - -
Vifa4g00842 435 CDD RING-H2 270 328 - -
Vifa4g00842 435 MobiDBLite consensus disorder prediction 388 416 - -
Vifa4g00842 435 MobiDBLite consensus disorder prediction 417 435 - -
Vifa4g00842 435 PANTHER EXPRESSED PROTEIN 1 334 - -
Vifa4g00842 435 MobiDBLite consensus disorder prediction 57 111 - -
Vifa4g00842 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 330 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00842 Vifa-Chr4 249192616 249194759 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00842 4 249192616 249194759 Vifa4g00842 4 249192616 249194759 ECH