Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00839 ATGGTGAAGGAAACTGCTTACTATGATACATTAGGTGTTAATGTTGATGCATCTGCTGCGGATATCAAGAAGGCTTATTATGTCAAGGCAAGAATAGTTCACCCTGATAAAAATCCCGGGGATCCCAAGGCTGCAGAAAATTTTCAGCTGCTTGGCGAGGCCTACCAGGTTTTAAGCGATCCCGATAAGCGTGAAGAATATGACAAGAATGGAAAGGAAGGAGTGTCACAAGATTCCATGATGGACCCTTCAACTGTATTTGGAATGCTTTTCGGAAGTGAATTTTTTGAAGAATATATTGGAAAACTTGCACTTGCTTCTTTAGCATCTATTGAAGTTGAGGAAGACTCACCGGAGCCTCAAGTTCGTATGCAAAAAATTCAGGAAAAGATGAAAGCATGGCAGAAGGAAAGAGAACAGAAGCTGGTATCGTTTCTGAAAGACCGTTTGCAACCATTTGTTGATGGTCGAGAAGAAGAATTTACATTGTGGGCAAATTCAGAAGCGAGTAATCTTTCAAAAGCTGCTTTTGGAGAGGCCATGCTACATACAATTGGTTATATCTACACACGAAAAGCAGCAAAAGAAATCGGAAAGGATATTCGGTTTATGAACGTTCCCTTCTTGGCCGAGTGGGTCCGAGACAAAGGACACCGTATAAAGTCACAAGTGACAGCAGCCTCAGGAGCTGTGTCCCTAATTCAAATACAAGAAGAGCTCAAGAAGCTAAATCAAGGAGAAAATAGAGAAGAAAATGTAATGAAAGCTCTCGAAGATAAGAAGGAAGCCATGGTTAATTCCTTATGGCGGATAAACGTGATTGATATTGAATCAACTCTGTCGCATGTTTGCCAAGCAGTTCTTAGAGATCCTAGTGCGACGAAAGAGGTTCTGAGGTCTCGAGCCAAAGCATTGAAAATGTTAGGAACCATCTTTCAAGGTGCTAAGGTTGCTTTTAGGAGAGAGAATAGTCTGCGCCGAGAGAACGAGAATCAGAATCGCGTAGAAGCTGGTCCCTCAACATAG 1026 0.4201 MVKETAYYDTLGVNVDASAADIKKAYYVKARIVHPDKNPGDPKAAENFQLLGEAYQVLSDPDKREEYDKNGKEGVSQDSMMDPSTVFGMLFGSEFFEEYIGKLALASLASIEVEEDSPEPQVRMQKIQEKMKAWQKEREQKLVSFLKDRLQPFVDGREEEFTLWANSEASNLSKAAFGEAMLHTIGYIYTRKAAKEIGKDIRFMNVPFLAEWVRDKGHRIKSQVTAASGAVSLIQIQEELKKLNQGENREENVMKALEDKKEAMVNSLWRINVIDIESTLSHVCQAVLRDPSATKEVLRSRAKALKMLGTIFQGAKVAFRRENSLRRENENQNRVEAGPST 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00839 341 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Vifa4g00839 341 Gene3D DnaJ domain 1 87 IPR036869 -
Vifa4g00839 341 CDD DnaJ 7 60 IPR001623 -
Vifa4g00839 341 PRINTS DnaJ domain signature 8 26 IPR001623 -
Vifa4g00839 341 PRINTS DnaJ domain signature 63 82 IPR001623 -
Vifa4g00839 341 PRINTS DnaJ domain signature 43 63 IPR001623 -
Vifa4g00839 341 PRINTS DnaJ domain signature 26 41 IPR001623 -
Vifa4g00839 341 Coils Coil 240 260 - -
Vifa4g00839 341 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Vifa4g00839 341 SMART dnaj_3 5 63 IPR001623 -
Vifa4g00839 341 Pfam X-domain of DnaJ-containing 135 325 IPR026894 -
Vifa4g00839 341 Coils Coil 124 144 - -
Vifa4g00839 341 SUPERFAMILY Chaperone J-domain 2 100 IPR036869 -
Vifa4g00839 341 Pfam DnaJ domain 7 68 IPR001623 -
Vifa4g00839 341 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00839 Vifa-Chr4 248251585 248257041 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00839 4 248251585 248257041 Vifa4g00839 4 248251585 248257041 ECH