Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00830 ATGTCTACTCTTGTTTCTCCTCATCATTTTACTCCCGAGGATGATGCTATGGTTCTTTATAAGGCTGTCAAAGGATGGGGGACTGATGAGAGTGCTATCATAGCTATAATGGGACATAGAAATGCTATTCAAAGGCAACAAATAAGACTAACCTACGAAAGTATGTACGAAGAAGATCTCATCAAACGTCTTGAATCAGAGTTGTCTGGTAACTTTGAGAAAGCAATGTATAGGTGGATATTGGAGCCTTCAGATTGTTATGCTGTGTTGGCAAATGTAGCTCTTAAGAATGTTTACAGAGATTATCATGTGATTGTGGAAATTGCTAGTGTTCTTAAACCTGAAGAGCTTCTGAATGTGCGGCGCGCCTATCATTATCGATTCCACCATTCTTTGGAAGAACATGTGGCTGCACATACCTCTGGCTATTTTCGCCAGTTTTTGGTTGGACTGGTGACCTCGTTTCGATATGGTGGTGATAATATCCATTCAAGTTTGGCAAAATATGAAGCTGAAATTCTTCATGATGCTATCAAAAACAAGAAAGGTAACCTTGAGGAAGTTATCAGGATCCTTACTACAAGGAGCAAGACCCAACTTAAGGCTACTTTCAACCGTTACAGAGATGATCATGGCTACTCTATTAGCAAGAGACTGTTGAGTGAAGAGTCTGATGACTTCCTTAAAGCTGTTCATGTCGCCATTCGTTGCATTGATGACCACAAGAAGTACTATGAAAAGATTCTTCGGAGTGCGCTGAAAAAGATTGGAACCGATGAAGATGAACTAACCCGCGTGGTGGTCACAAGGGCTGAGAAGGACTTGAAGGACATCAAAGAGCTGTATTACCATAGAAACAGTGTTCGTCTCGAGGATGCAGTGGCCAGGGAGATCTCAGGAGACTACAAGAGGTTCCTTCTTACTCTTATAGGAAGAGAATACTAA 945 0.4138 MSTLVSPHHFTPEDDAMVLYKAVKGWGTDESAIIAIMGHRNAIQRQQIRLTYESMYEEDLIKRLESELSGNFEKAMYRWILEPSDCYAVLANVALKNVYRDYHVIVEIASVLKPEELLNVRRAYHYRFHHSLEEHVAAHTSGYFRQFLVGLVTSFRYGGDNIHSSLAKYEAEILHDAIKNKKGNLEEVIRILTTRSKTQLKATFNRYRDDHGYSISKRLLSEESDDFLKAVHVAIRCIDDHKKYYEKILRSALKKIGTDEDELTRVVVTRAEKDLKDIKELYYHRNSVRLEDAVAREISGDYKRFLLTLIGREY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00830 314 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Vifa4g00830 314 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Vifa4g00830 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Vifa4g00830 314 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Vifa4g00830 314 PRINTS Annexin family signature 297 310 IPR001464 GO:0005509|GO:0005544
Vifa4g00830 314 ProSiteProfiles Annexin repeat profile. 240 311 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 FunFam Annexin 165 239 - -
Vifa4g00830 314 Gene3D Annexin 165 239 IPR037104 GO:0005509|GO:0005544
Vifa4g00830 314 SMART annex3 101 151 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 SMART annex3 182 235 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 SMART annex3 257 309 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 PRINTS Plant annexin signature 225 243 IPR009118 -
Vifa4g00830 314 PRINTS Plant annexin signature 118 132 IPR009118 -
Vifa4g00830 314 PRINTS Plant annexin signature 160 180 IPR009118 -
Vifa4g00830 314 ProSiteProfiles Annexin repeat profile. 165 236 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 FunFam Annexin 1 81 - -
Vifa4g00830 314 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Vifa4g00830 314 SUPERFAMILY Annexin 2 312 IPR037104 GO:0005509|GO:0005544
Vifa4g00830 314 Gene3D Annexin 242 312 IPR037104 GO:0005509|GO:0005544
Vifa4g00830 314 FunFam Annexin 241 312 - -
Vifa4g00830 314 ProSitePatterns Annexin repeat signature. 257 309 IPR018252 GO:0005509|GO:0005544
Vifa4g00830 314 Pfam Annexin 247 309 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 Pfam Annexin 169 231 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 Pfam Annexin 100 151 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 Gene3D Annexin 82 153 IPR037104 GO:0005509|GO:0005544
Vifa4g00830 314 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Vifa4g00830 314 PANTHER ANNEXIN 9 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00830 Vifa-Chr4 245966824 245968518 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00830 4 245966824 245968518 Vifa4g00830 4 245966824 245968518 ECH
Vifa2g00297 2 48462840 48464822 Vifa4g00830 4 245966824 245968518 PCT