Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00829 ATGGCTACTCTTATTGCTCCTAGCAACCATTCTCCACAAGAAGATGCTGAATCTCTAAGAAAGGCTTTTGAAGGTTGGGGTACTGATGAGAGAACAGTGATAACAATTCTTGGTCATAGAAACTCTCATCAGATTCAACAAATCAGAAGAGCTTATGAAGAGATTTACCAAGAGGATCTTATCAAACGTTTGGAATCTGAACTGAAAGGAGACTTTGAGAAAGCTGTGTACCGTTGGATCTTGGAACCGGCTGATCGTGATGCTGTTTTGGCCAATGTTGCTATCAAGAGTGGTAAGAACTACAATGTGGTTGTTGAGATTGCTTCGATTTTGTCCCCGGAAGAGCTTTTTAATGTGAGACGCGCTTATATTAAGCGCTATAAGCACTCCTTGGAAGAGGATTTGGCTACTCATACCTCAGGCCATCTTCGCCAGCTTTTGGTAGGGTTGGTGACTGCATTTAGGTATGTTGGTGATGATGTGAATGCAAGATTAGCACAAAGTGAAGCTGATATTCTTCATGAGGCTGTGAAAGAGAAGAAAGGAAGCCAGGAAGAAGCTGTTAGGATCTTGACTACAAGGAGTAAGGCTCAGCTGATTGCAACTTTCAACCGTTACAGAGAGACTCACGGTACTTCCATTACTAAGAAGCTGTTGGATGAAGGATCAGATGATTTTCAGAAGGCTTTGTACACCACCATTCGTTCCTTCACCGATCATGTTAAGTATTATGAAAAGGTGGTGCGAGATGCGGTGAAGAAGATTGGAACCGATGAGGATGCGCTCACCCGTGTGATTGTGAGCAGGGCTCAACATGATCTGAAATCCATCTCAGATGTTTATCACAAGAGAAACAGTGTTCCTTTTGAGCATGTTGTAGCTAAGGAAACTTCAGGGGATTACAAGAAGCTCCTTCTCACTCTTTTGGGCCAAGAAGATTGA 942 0.4289 MATLIAPSNHSPQEDAESLRKAFEGWGTDERTVITILGHRNSHQIQQIRRAYEEIYQEDLIKRLESELKGDFEKAVYRWILEPADRDAVLANVAIKSGKNYNVVVEIASILSPEELFNVRRAYIKRYKHSLEEDLATHTSGHLRQLLVGLVTAFRYVGDDVNARLAQSEADILHEAVKEKKGSQEEAVRILTTRSKAQLIATFNRYRETHGTSITKKLLDEGSDDFQKALYTTIRSFTDHVKYYEKVVRDAVKKIGTDEDALTRVIVSRAQHDLKSISDVYHKRNSVPFEHVVAKETSGDYKKLLLTLLGQED 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00829 313 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 Pfam Annexin 169 230 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 Pfam Annexin 247 308 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 Pfam Annexin 90 150 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 PANTHER ANNEXIN 12 308 - -
Vifa4g00829 313 Gene3D Annexin 241 313 IPR037104 GO:0005509|GO:0005544
Vifa4g00829 313 Gene3D Annexin 82 152 IPR037104 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Plant annexin signature 159 179 IPR009118 -
Vifa4g00829 313 PRINTS Plant annexin signature 117 131 IPR009118 -
Vifa4g00829 313 PRINTS Plant annexin signature 224 242 IPR009118 -
Vifa4g00829 313 FunFam Annexin 1 81 - -
Vifa4g00829 313 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Annexin family signature 172 198 IPR001464 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Vifa4g00829 313 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Vifa4g00829 313 FunFam Annexin 164 238 - -
Vifa4g00829 313 Gene3D Annexin 164 238 IPR037104 GO:0005509|GO:0005544
Vifa4g00829 313 FunFam Annexin 82 151 - -
Vifa4g00829 313 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 ProSiteProfiles Annexin repeat profile. 82 152 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 SMART annex3 182 233 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Vifa4g00829 313 FunFam Annexin 240 311 - -
Vifa4g00829 313 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00829 Vifa-Chr4 245950257 245951844 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00829 4 245950257 245951844 Vifa4g00829 4 245950257 245951844 ECH
Vifa2g00298 2 48869041 48870704 Vifa4g00829 4 245950257 245951844 PCT