Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00823 ATGAGTAGGTATTGTTTTCAAACTCTTGTTTTCTTTTTTCTTTCATGCTTGTTCATTTCTTTTTCTTACGCATTAAACAATGGTTTTAGCGTTGAACTCATCCATCGTGATTCTTCAAATTCACCACTCTATGAACCTACACAAAACAAATACAAATGTGTTGTCAATGCTATTCGTCGTTCCATGAACTATCTTTCCTACAAAAATTCTCTCACTAATATACCCAAATCTACTATTATCCCCGATTTCGGTGAATATATTATGACCTATTCATTAGGTACTCCACCCGTTAAAATATATGGTATTGTTGGTACAGGTAGTGACATTGTTTGGCTTCAATGTCAGCCTTGTAGGAAATGTTACAAACAAGTCACTCCTATTTTTGATCCTTCAAAGTCTAAAAGTTATAAAAACCTTCTTTGTTCATCTAAGCAATGTAAATCTGTGGATTTTCATTCTTGCAGTAAAAACAATTCTTGTGAATATTCTGTTGATTATGTTGGTGGAACAGTATCAGAAGGAGATCTTGGTATGGAGACTCTTACATTGGATTCCACCTCTGGCCATTCTATCTCATTTCCCAATTTTGTGATAGGATGTGGACATAAAAATACAATGTCTTTTCAAGGTAGAAACTCTGGTGTAGTGGGTATTGGAGGTGGACCTATATCTCTTATAACACAATTGGGTTTATCAATCGGTGGAAAGTTCTCTTATTGTTTTGGACCATCAACGTCTAACTCAACGAGCAAACTCAATTTTGGACATGCTGCAGTGGTTTCTGGTCGTGGGGTTGTCTCAACTACTTTAGTGAAAAAATCTCCACCAATTTTTTACTTCGTAACACTCAATGCATTTAGTGTTAATAACAAAAGAATAAGATTTTCTAAACCGCCAGTTGAAGGGAACTTCATAATCGATTCAGGTACAACGTTGACGATTTTACCATCCAATATTTATAAAAATGTGGAATCAACTCTAGTTGCATTGGTTAAGTTGAAGCGCGTGAAAGATCCAAATGGAATTTTGAGCCTTTGTTATTCTGATAAATCAAATAAATACGTGTTTCCTAAAATTATGGCACATTTTAAGGGTGCAGATGTTTGGCTCAATTCTATTAGCACTTTTATTCCAGTTGCTGATGGAGTTGTTTGTTTGGCTTTTGCCCCATCTCAAGACGGCAATGGCGTCATCGGAAACTTGGCTCAACAAAATTTATTGGTTGGTTATGACCTTAATCGAAATATTGTTTCTTTTAAGGCAGCTGATTGTACCAAAGTGTAA 1284 0.3544 MSRYCFQTLVFFFLSCLFISFSYALNNGFSVELIHRDSSNSPLYEPTQNKYKCVVNAIRRSMNYLSYKNSLTNIPKSTIIPDFGEYIMTYSLGTPPVKIYGIVGTGSDIVWLQCQPCRKCYKQVTPIFDPSKSKSYKNLLCSSKQCKSVDFHSCSKNNSCEYSVDYVGGTVSEGDLGMETLTLDSTSGHSISFPNFVIGCGHKNTMSFQGRNSGVVGIGGGPISLITQLGLSIGGKFSYCFGPSTSNSTSKLNFGHAAVVSGRGVVSTTLVKKSPPIFYFVTLNAFSVNNKRIRFSKPPVEGNFIIDSGTTLTILPSNIYKNVESTLVALVKLKRVKDPNGILSLCYSDKSNKYVFPKIMAHFKGADVWLNSISTFIPVADGVVCLAFAPSQDGNGVIGNLAQQNLLVGYDLNRNIVSFKAADCTKV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00823 427 SUPERFAMILY Acid proteases 81 424 IPR021109 -
Vifa4g00823 427 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vifa4g00823 427 Gene3D Acid Proteases 260 426 IPR021109 -
Vifa4g00823 427 Gene3D Acid Proteases 66 256 IPR021109 -
Vifa4g00823 427 Pfam Xylanase inhibitor N-terminal 86 256 IPR032861 -
Vifa4g00823 427 FunFam Probable aspartic protease At2g35615 66 255 - -
Vifa4g00823 427 Pfam Xylanase inhibitor C-terminal 279 420 IPR032799 -
Vifa4g00823 427 CDD pepsin_A_like_plant 85 424 IPR034161 -
Vifa4g00823 427 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 304 315 IPR001969 GO:0004190|GO:0006508
Vifa4g00823 427 PANTHER OS07G0603500 PROTEIN-RELATED 31 425 - -
Vifa4g00823 427 FunFam Aspartic proteinase CDR1 257 427 - -
Vifa4g00823 427 ProSiteProfiles Peptidase family A1 domain profile. 86 420 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00823 Vifa-Chr4 244978933 244980216 Proximal