Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00821 ATGAGTACACCACACTTATTTCTTATCCTAATTTACTTTTCCTTTTCTTTCATTATTTCTTTTGCTCATGCTCTCAACAATGGTATTAGTGTTGAACTCATCCATCGTGACTCTTTAAAATCACCATTCCAACAACCTACACAAAACAAATATCAACATGTTATGAATGCCTTACGTCGTTCCATCAATCGTGTCAATCATTTCTATAAAGACTCCCTCACTAATACACCTAAATCAACAGTAATCTCAGATAATTTTGAGTACTTAATGAGTTACTCAATTGGCACCCCACCATTTCATGTACTAGGCATTGTTGACACAGGTAGTGATATTGTTTGGCTTCAATGTGAGCCTTGTGAACAATGTTATAACCAAACCACTCCAATATTTAATCCTTTAAAATCATCAAGTTACAAAAACATTCCCTGTACTTCCAAATTTTGTAACTCTTGTAGCGAACAAAATTCTTGTGAATATACTATTAGATATGGGGATCAATCAATTACAAAGGGAGATCTTAGTCTTGAGACTTTTACATTAGATTCCAACACTGGTAATTCCGTTTCATTTCGTAAAACAACTATAGGATGTGGACATAGTAATATAGGGACATTTAAAGGTGCAAGCTCTGGGATAGTTGGTCTTGGAAATGGAGAGTTGTCTCTTATAAAGCAATTGGAAACAACAATTGGTGAGAAATTCTCTTATTGTTTAGTTCCATACTCTCCTAAATCAAACACGTCGAGCATACTCAATTTTGGAGATGTTGCCGTGGTTTCTGGTGATGGAGTTGTTTCAACTCCTATAGTGATAAAGTATCCACCAACATTTTACTTTTTAACATTAGAAGCATTCAGTGTTGGAAGCAAGAGAATAGAATTTGGAGGGTCTTCAAGTGGCCGTGACGACGAGGGTAACATTATAATTGATTCAGGTACAACGTTGACACTTTTACCAAGTGAAGTTTATACTAATTTGGAATCAGCTGTTGCAGAATTGGTGCAGATGTCAAGTTGGAATCTATTAGTACATTTGTTTCCCGTTGTTGATGACATTGTTTGTTTTGCTTTTCAATCAAATGAAAATGGTATAATCTTTGGAAACTTGGCTCAACAAAATTTGTTGGTTGGTTATGATCTTCAAAAGAAAACCGTGTCATTTAAGCCTACAGATTGTACTAAGTGGAACTTAATGTAG 1197 0.35 MSTPHLFLILIYFSFSFIISFAHALNNGISVELIHRDSLKSPFQQPTQNKYQHVMNALRRSINRVNHFYKDSLTNTPKSTVISDNFEYLMSYSIGTPPFHVLGIVDTGSDIVWLQCEPCEQCYNQTTPIFNPLKSSSYKNIPCTSKFCNSCSEQNSCEYTIRYGDQSITKGDLSLETFTLDSNTGNSVSFRKTTIGCGHSNIGTFKGASSGIVGLGNGELSLIKQLETTIGEKFSYCLVPYSPKSNTSSILNFGDVAVVSGDGVVSTPIVIKYPPTFYFLTLEAFSVGSKRIEFGGSSSGRDDEGNIIIDSGTTLTLLPSEVYTNLESAVAELVQMSSWNLLVHLFPVVDDIVCFAFQSNENGIIFGNLAQQNLLVGYDLQKKTVSFKPTDCTKWNLM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00821 398 CDD pepsin_A_like_plant 87 392 IPR034161 -
Vifa4g00821 398 Gene3D Acid Proteases 340 398 IPR021109 -
Vifa4g00821 398 FunFam Probable aspartic protease At2g35615 68 254 - -
Vifa4g00821 398 Gene3D Acid Proteases 69 253 IPR021109 -
Vifa4g00821 398 Pfam Xylanase inhibitor C-terminal 346 388 IPR032799 -
Vifa4g00821 398 Pfam Xylanase inhibitor C-terminal 278 336 IPR032799 -
Vifa4g00821 398 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 307 318 IPR001969 GO:0004190|GO:0006508
Vifa4g00821 398 ProSiteProfiles Peptidase family A1 domain profile. 88 398 IPR033121 -
Vifa4g00821 398 PANTHER OS07G0603500 PROTEIN-RELATED 334 393 - -
Vifa4g00821 398 Gene3D Acid Proteases 254 339 IPR021109 -
Vifa4g00821 398 Pfam Xylanase inhibitor N-terminal 88 255 IPR032861 -
Vifa4g00821 398 SUPERFAMILY Acid proteases 81 393 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00821 Vifa-Chr4 244803601 244804900 Proximal