Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00811 ATGGCTTCTCCTTCTTCTTCCACTTCTTTGGTTGGTCCACTTCTTCTTTCTCCACACAATGGTTATAAAGTGTGGGAAGACCCATCTTTCATCAAATGGAGAAAAAGAGACCCTCATGTTCATTTACATTGCCATGAATCCATTGAAGGTTCTCTGAAATATTGGTATCAACGCAGCAAAGTGGATTATCTGGCTTCTCAATCTGCTGTTTGGAAAGATGATGCTGTTAATGGTTCTCTTGAGAGTGCTGCTTTTTGGGTCAAAGACTTGCCTTTTGTTAAATCTTTATCTGGATATTGGAAATTTTTCTTGTCTTCTAATCCCACCAATGTCCCTACTAAGTTTCATGAAAATGAGTTCCAGGATTCAGAATGGAATACTTTACCTGTTCCTTCCAATTGGCAGCTCCATGGATTCGACCGTCCTATATATACGAATGTAACGTATCCGTTTCCGCTTGATCCTCCTTTTGTTCCCACGGAGAATCCTACTGGCTGCTACAGAATGGACTTCCTACTTCCTAAAGAATGGGAAGGTAGAAGAATTTTGTTACATTTTGAAGCAGTTGATTCCGCGTTTTGTGCATGGATAAACGGGCATCCTATAGGATATAGTCAAGACAGCAGGCTACCTGCAGAGTTTGAAGTCACCGATTTTTGTCATCCATGTGGTTCAGACCTAAAGAATGTTCTAGCCGTTCAAGTGTTTAGATGGAGTGACGGGTGTTACCTCGAGGATCAGGATCACTGGCGTTTATCTGGCATCCACCGTGACGTTCTTCTTCTTGCAAAGCCAGAGGTATTTATCACGGACTATTTCTTCAAATCAAACCTCGCTGAAGATTTTTCTTACGCGGAGATGCTGGTTGAAGTTAGAATCGATAGATTACAAGATACATCAAAGGACAATGTTCTTACAAACTACACCATAGAAGCTATATTGTTTGATTCTGGAAGCTGGGAATCCTCCGACGGGAATCCTGATCTACTTTCAACGAACGTAGCAGACATAACATTCCAACCAACAACTGCGCCGTTGGGGTTTTATGGTTATACGCTCGTGGGAAAACTGCAATCACCAAAGCTCTGGTCAGCAGAACAGCCATACCTCTATACATTAGTCGTTGTTCTCAAGGATAAATCCGGCCGTGTGCTCGATTGTGAATCATCTCAAGTAGGCTTTAAAACTGTATCTAAAGCCCACAAACAACTCCTAGTTAATGGACATCCCGTTGTAATACGAGGCGTGAACAGACACGAACATCATCCAGAAGTTGGAAAGGCAAACATAGAAGCCTGCATGGTCAAGGACTTGGTCTTAATGAAGCAAAACAATATTAATGCAGTGCGGAACAGCCATTATCCTCAACATCCGCGTTGGTATGAGCTATGTGATTTGTTCGGCATGTACATGATCGATGAAGCCAATATTGAGACACATGGTTTTGATTATTCTAAACATCTCAAGCATCCGACTTTGGAACCAGTATGGGCAACTGCAATGTTGGACCGTGTGATTGGCATGGTCGAGAGGGATAAAAACCACACCTGCATTATTTCGTGGTCTTTAGGAAACGAATCCGGATTCGGAACAAATCATTTCGCTATGGCTGGTTGGATTCGAGGAAGAGATTCTTCGCGTGTGATACATTATGAAGGAGGCGGATCAAGAACTCCATGTACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGTTGAAAATTGCCAACGATCCTAACGAAACACGTCCTGTGATACTTTGCGAGTATTCACATGCAATGGGAAACAGCAATGGGAACTTGCATGTATATTGGGAAGCAATTGACAACACATTCGGGCTTCAAGGAGGATTTATATGGGATTGGGTTGATCAGGCTCTGCGGAAGGTTCATGCAGACGGTACAAAGCATTGGGCATATGGAGGTGAATTTGGAGATACTCCCAATGATCTGAATTTTTGTTTGAACGGTCTTGTATGGCCTGATCGAACTCCACATCCTGTCTTACATGAAGTCAAGTACTTATATCAGCCGATCAAAGTGAATTTAAATGAAGGGAAATTAGAGATAAAAAATACTCATTTTTTTCAAACAACAGAAGGATTGGAGTTCACATGGTATATTTCTGCAGATGGATACAATCTTGGATCTGGTAAGTTGAGTCTTCCCTCGATAAAGGCCCAAGGTAGTTATGCTGTCGATTGGCAATCGGGTCCATGGTATTCTCTATGGAATTCATCGTCATCAGAAGAAGTGTTCTTGACAATAACTGCTAAACTTTTGAACTCGACGCGCTGGGTTGAAGCTGGTCATATCGTTTCCACTGCTCAAGTTCAACTGCCACCTAGGAGAGACACTGTTCCTCATGCTATCGATATTCATGGTGGCGCTCTAGTCGTTGAAACCGTTGGAGATATAGTTAAAGTAAGCCAGCAAGATGTTTCGGACATAACATTGAACACTAAAACAGGTTTAATCGAAAGCTGGAAGGTAAAAGGAGTAGAGGTTATGAATAAGGGCGTACACCCGTGTTTCTGGCGAGCTTCGATTGATAATGATAAAGGAGGAGGAACTGATAGTTATTTGTCCAGATGGAAAGCTGCTGGAATTGACAGTGTCCACTTTATCGCTGAGAGCTGTTCTGTACAGAATACGACAGAAGACTCGGTTAAAGTGTCAGTGGTTTTTCATGGTGTTACAAAGGGTGAGGAGGGTTCAAAGGTTTTGTTTACAACGGAAATGACGTACTCTATTTACGCTTCTGGAGATGTCATTTTGGATTTCAACGTGAAGCCGGATTCCAATCTTCCTCCTTTGCCACGAGTAGGAATCGAGATGAACTTGGAAAAATCATTGGATCAAGTAAGTTGGTACGGAAGAGGGCCGTTCGAGTGTTATCCTGACAGAAAAGCCGCTGCGAATGTCGCAGTTTACGAGAAGAACGTTGACGAGTTGCATGTTCCTTATATTGTTCCTGGTGAATGTGGTGGTAGAGCAGATGTTAGATGGGCAACATTTGTAAACAAAAACGGTTTCGGAATATATGCTTCAAAATGCGGTAGCTCTCCACCCATGCAAATGAGTGCAAGCTACTATAGCACTTCGGAACTTGACCGGGCCGCACACGATTATGAGCTTGTTAAAGGAGATAGCATTGAGGTTCATCTGGATCACAAGCACATGGGGTTGGGTGGAGATGACAGTTGGTCTCCGTGTGTCCACGATCAATATTTGGTTCCTGCTGTGCCGCACTCATTCTCTGTCAGGTTGTCTCCGGTAACTCCGGATACTTCTGGTCACGATATTTACAGATCCCAGCTCTTGATTCCTTGA 3339 0.4292 MASPSSSTSLVGPLLLSPHNGYKVWEDPSFIKWRKRDPHVHLHCHESIEGSLKYWYQRSKVDYLASQSAVWKDDAVNGSLESAAFWVKDLPFVKSLSGYWKFFLSSNPTNVPTKFHENEFQDSEWNTLPVPSNWQLHGFDRPIYTNVTYPFPLDPPFVPTENPTGCYRMDFLLPKEWEGRRILLHFEAVDSAFCAWINGHPIGYSQDSRLPAEFEVTDFCHPCGSDLKNVLAVQVFRWSDGCYLEDQDHWRLSGIHRDVLLLAKPEVFITDYFFKSNLAEDFSYAEMLVEVRIDRLQDTSKDNVLTNYTIEAILFDSGSWESSDGNPDLLSTNVADITFQPTTAPLGFYGYTLVGKLQSPKLWSAEQPYLYTLVVVLKDKSGRVLDCESSQVGFKTVSKAHKQLLVNGHPVVIRGVNRHEHHPEVGKANIEACMVKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHPTLEPVWATAMLDRVIGMVERDKNHTCIISWSLGNESGFGTNHFAMAGWIRGRDSSRVIHYEGGGSRTPCTDIVCPMYMRVWDMLKIANDPNETRPVILCEYSHAMGNSNGNLHVYWEAIDNTFGLQGGFIWDWVDQALRKVHADGTKHWAYGGEFGDTPNDLNFCLNGLVWPDRTPHPVLHEVKYLYQPIKVNLNEGKLEIKNTHFFQTTEGLEFTWYISADGYNLGSGKLSLPSIKAQGSYAVDWQSGPWYSLWNSSSSEEVFLTITAKLLNSTRWVEAGHIVSTAQVQLPPRRDTVPHAIDIHGGALVVETVGDIVKVSQQDVSDITLNTKTGLIESWKVKGVEVMNKGVHPCFWRASIDNDKGGGTDSYLSRWKAAGIDSVHFIAESCSVQNTTEDSVKVSVVFHGVTKGEEGSKVLFTTEMTYSIYASGDVILDFNVKPDSNLPPLPRVGIEMNLEKSLDQVSWYGRGPFECYPDRKAAANVAVYEKNVDELHVPYIVPGECGGRADVRWATFVNKNGFGIYASKCGSSPPMQMSASYYSTSELDRAAHDYELVKGDSIEVHLDHKHMGLGGDDSWSPCVHDQYLVPAVPHSFSVRLSPVTPDTSGHDIYRSQLLIP 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00811 1112 SMART Bgal_small_N_2 810 1093 IPR004199 GO:0004565|GO:0005975|GO:0009341
Vifa4g00811 1112 Pfam Beta galactosidase small chain 817 1092 IPR004199 GO:0004565|GO:0005975|GO:0009341
Vifa4g00811 1112 PRINTS Glycosyl hydrolase family 2 signature 585 600 IPR006101 GO:0004553|GO:0005975
Vifa4g00811 1112 PRINTS Glycosyl hydrolase family 2 signature 437 455 IPR006101 GO:0004553|GO:0005975
Vifa4g00811 1112 PRINTS Glycosyl hydrolase family 2 signature 406 420 IPR006101 GO:0004553|GO:0005975
Vifa4g00811 1112 PRINTS Glycosyl hydrolase family 2 signature 189 204 IPR006101 GO:0004553|GO:0005975
Vifa4g00811 1112 PRINTS Glycosyl hydrolase family 2 signature 512 527 IPR006101 GO:0004553|GO:0005975
Vifa4g00811 1112 Pfam Glycosyl hydrolases family 2 267 395 IPR006102 GO:0004553|GO:0005975
Vifa4g00811 1112 Pfam Glycosyl hydrolases family 2, sugar binding domain 94 265 IPR006104 GO:0004553|GO:0005975
Vifa4g00811 1112 FunFam Beta-galactosidase 396 678 - -
Vifa4g00811 1112 SUPERFAMILY Galactose mutarotase-like 802 1095 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa4g00811 1112 SUPERFAMILY Galactose-binding domain-like 93 265 IPR008979 -
Vifa4g00811 1112 PANTHER BETA-GALACTOSIDASE 23 1107 - -
Vifa4g00811 1112 Gene3D Glycosidases 396 677 - -
Vifa4g00811 1112 SUPERFAMILY (Trans)glycosidases 400 679 IPR017853 -
Vifa4g00811 1112 Gene3D - 800 1093 IPR014718 GO:0030246
Vifa4g00811 1112 Gene3D - 17 265 - -
Vifa4g00811 1112 FunFam Glycoside hydrolase family 2 protein 799 1094 - -
Vifa4g00811 1112 SUPERFAMILY beta-Galactosidase/glucuronidase domain 267 394 IPR036156 -
Vifa4g00811 1112 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 512 526 IPR023232 -
Vifa4g00811 1112 Gene3D Immunoglobulins 266 395 IPR013783 -
Vifa4g00811 1112 SUPERFAMILY beta-Galactosidase/glucuronidase domain 675 785 IPR036156 -
Vifa4g00811 1112 Pfam Beta-galactosidase, domain 4 690 783 IPR032312 -
Vifa4g00811 1112 Gene3D Immunoglobulins 679 787 IPR013783 -
Vifa4g00811 1112 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 447 472 IPR023230 -
Vifa4g00811 1112 Pfam Glycosyl hydrolases family 2, TIM barrel domain 401 682 IPR006103 GO:0004553|GO:0005975